Penta-nucleotide Imperfect Repeats of Theobroma cacao chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_014676 | CTCTT | 4 | 7527 | 7545 | 19 | 0 % | 60 % | 0 % | 40 % | 10 % | 31319968 |
| 2 | NC_014676 | TTTCT | 4 | 8769 | 8787 | 19 | 0 % | 80 % | 0 % | 20 % | 10 % | Non-Coding |
| 3 | NC_014676 | AAATA | 3 | 33604 | 33617 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
| 4 | NC_014676 | AAATC | 3 | 33929 | 33944 | 16 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
| 5 | NC_014676 | TGAAA | 3 | 34131 | 34145 | 15 | 60 % | 20 % | 20 % | 0 % | 0 % | Non-Coding |
| 6 | NC_014676 | AAAAT | 3 | 38129 | 38142 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
| 7 | NC_014676 | TAATA | 4 | 38494 | 38512 | 19 | 60 % | 40 % | 0 % | 0 % | 10 % | Non-Coding |
| 8 | NC_014676 | GTAAA | 4 | 46866 | 46884 | 19 | 60 % | 20 % | 20 % | 0 % | 5 % | 31319970 |
| 9 | NC_014676 | GTATA | 3 | 54378 | 54393 | 16 | 40 % | 40 % | 20 % | 0 % | 6 % | Non-Coding |
| 10 | NC_014676 | TTAAA | 3 | 76217 | 76231 | 15 | 60 % | 40 % | 0 % | 0 % | 0 % | 31319968 |
| 11 | NC_014676 | TGCTT | 4 | 78804 | 78822 | 19 | 0 % | 60 % | 20 % | 20 % | 10 % | 31319968 |
| 12 | NC_014676 | TTATA | 3 | 80112 | 80125 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 31319968 |
| 13 | NC_014676 | TCCTT | 3 | 85352 | 85367 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | 31319968 |
| 14 | NC_014676 | ATATG | 3 | 91303 | 91317 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 31319968 |
| 15 | NC_014676 | GAAAG | 3 | 99051 | 99066 | 16 | 60 % | 0 % | 40 % | 0 % | 6 % | 31319968 |
| 16 | NC_014676 | TCCGG | 3 | 99927 | 99941 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 31319968 |
| 17 | NC_014676 | TTTCG | 3 | 102537 | 102550 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 31319968 |
| 18 | NC_014676 | TTCTA | 4 | 104939 | 104957 | 19 | 20 % | 60 % | 0 % | 20 % | 10 % | 31319972 |
| 19 | NC_014676 | TAAAG | 13 | 110091 | 110155 | 65 | 60 % | 20 % | 20 % | 0 % | 1 % | 31319972 |
| 20 | NC_014676 | TAGTT | 3 | 119230 | 119243 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | 31319972 |
| 21 | NC_014676 | ACTTT | 13 | 139797 | 139861 | 65 | 20 % | 60 % | 0 % | 20 % | 3 % | 31319972 |
| 22 | NC_014676 | GGAAT | 3 | 145292 | 145307 | 16 | 40 % | 20 % | 40 % | 0 % | 6 % | 31319972 |
| 23 | NC_014676 | ACCGG | 3 | 150011 | 150025 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
| 24 | NC_014676 | CTTTC | 3 | 150887 | 150902 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | Non-Coding |
| 25 | NC_014676 | CATAC | 3 | 151281 | 151294 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |