Mono-nucleotide Imperfect Repeats of Theobroma cacao chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014676 | T | 15 | 268 | 282 | 15 | 0 % | 100 % | 0 % | 0 % | 6 % | Non-Coding |
2 | NC_014676 | T | 14 | 371 | 384 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
3 | NC_014676 | T | 12 | 1780 | 1791 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | Non-Coding |
4 | NC_014676 | A | 14 | 3966 | 3979 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_014676 | T | 14 | 4718 | 4731 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
6 | NC_014676 | T | 14 | 5041 | 5054 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
7 | NC_014676 | A | 16 | 5715 | 5730 | 16 | 100 % | 0 % | 0 % | 0 % | 6 % | 31319968 |
8 | NC_014676 | A | 13 | 6920 | 6932 | 13 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_014676 | T | 14 | 12351 | 12364 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | 31319968 |
10 | NC_014676 | T | 13 | 12725 | 12737 | 13 | 0 % | 100 % | 0 % | 0 % | 7 % | 31319968 |
11 | NC_014676 | A | 14 | 13318 | 13331 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
12 | NC_014676 | T | 24 | 13435 | 13458 | 24 | 0 % | 100 % | 0 % | 0 % | 8 % | Non-Coding |
13 | NC_014676 | A | 13 | 17038 | 17050 | 13 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
14 | NC_014676 | T | 15 | 19276 | 19290 | 15 | 0 % | 100 % | 0 % | 0 % | 6 % | 31319969 |
15 | NC_014676 | A | 20 | 23318 | 23337 | 20 | 100 % | 0 % | 0 % | 0 % | 5 % | 31319969 |
16 | NC_014676 | T | 12 | 27020 | 27031 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | 31319969 |
17 | NC_014676 | A | 13 | 27960 | 27972 | 13 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
18 | NC_014676 | T | 12 | 30173 | 30184 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | Non-Coding |
19 | NC_014676 | T | 12 | 44449 | 44460 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | Non-Coding |
20 | NC_014676 | A | 12 | 46882 | 46893 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | 31319970 |
21 | NC_014676 | A | 15 | 47201 | 47215 | 15 | 100 % | 0 % | 0 % | 0 % | 6 % | Non-Coding |
22 | NC_014676 | A | 14 | 50262 | 50275 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
23 | NC_014676 | T | 16 | 51563 | 51578 | 16 | 0 % | 100 % | 0 % | 0 % | 6 % | Non-Coding |
24 | NC_014676 | T | 12 | 55540 | 55551 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | Non-Coding |
25 | NC_014676 | A | 12 | 70183 | 70194 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | Non-Coding |
26 | NC_014676 | T | 14 | 70968 | 70981 | 14 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
27 | NC_014676 | A | 14 | 75425 | 75438 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | 31319968 |
28 | NC_014676 | A | 14 | 75609 | 75622 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | 31319968 |
29 | NC_014676 | T | 14 | 76149 | 76162 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | 31319968 |
30 | NC_014676 | T | 14 | 76512 | 76525 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | 31319968 |
31 | NC_014676 | A | 15 | 81457 | 81471 | 15 | 100 % | 0 % | 0 % | 0 % | 6 % | 31319968 |
32 | NC_014676 | T | 16 | 83223 | 83238 | 16 | 0 % | 100 % | 0 % | 0 % | 6 % | 31319968 |
33 | NC_014676 | T | 15 | 89382 | 89396 | 15 | 0 % | 100 % | 0 % | 0 % | 6 % | 31319968 |
34 | NC_014676 | T | 16 | 104411 | 104426 | 16 | 0 % | 100 % | 0 % | 0 % | 6 % | 31319972 |
35 | NC_014676 | A | 14 | 117303 | 117316 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | 31319972 |
36 | NC_014676 | T | 12 | 124253 | 124264 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | 31319972 |
37 | NC_014676 | A | 24 | 125979 | 126002 | 24 | 100 % | 0 % | 0 % | 0 % | 8 % | 31319972 |
38 | NC_014676 | T | 17 | 134107 | 134123 | 17 | 0 % | 100 % | 0 % | 0 % | 5 % | 31319972 |
39 | NC_014676 | C | 12 | 134237 | 134248 | 12 | 0 % | 0 % | 0 % | 100 % | 8 % | 31319972 |
40 | NC_014676 | A | 15 | 145532 | 145546 | 15 | 100 % | 0 % | 0 % | 0 % | 6 % | 31319972 |
41 | NC_014676 | A | 12 | 160562 | 160573 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | Non-Coding |