Penta-nucleotide Imperfect Repeats of Castanea mollissima chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_014674 | ATAAA | 3 | 4870 | 4884 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
2 | NC_014674 | TTAAT | 3 | 5447 | 5461 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 31318397 |
3 | NC_014674 | CTCTT | 3 | 5623 | 5636 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 31318397 |
4 | NC_014674 | TATTT | 3 | 7811 | 7825 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
5 | NC_014674 | ATAAG | 3 | 8805 | 8819 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
6 | NC_014674 | TGATT | 3 | 10040 | 10053 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | Non-Coding |
7 | NC_014674 | AGAAT | 3 | 10131 | 10145 | 15 | 60 % | 20 % | 20 % | 0 % | 0 % | Non-Coding |
8 | NC_014674 | TAATT | 3 | 11510 | 11524 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
9 | NC_014674 | TTATT | 3 | 40103 | 40118 | 16 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
10 | NC_014674 | ATTTT | 3 | 40119 | 40133 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
11 | NC_014674 | ATTTT | 3 | 49478 | 49491 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
12 | NC_014674 | CGATT | 3 | 49658 | 49672 | 15 | 20 % | 40 % | 20 % | 20 % | 6 % | Non-Coding |
13 | NC_014674 | ATCCA | 3 | 59923 | 59937 | 15 | 40 % | 20 % | 0 % | 40 % | 6 % | Non-Coding |
14 | NC_014674 | TTGTT | 3 | 62530 | 62543 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
15 | NC_014674 | TGAAA | 3 | 66044 | 66059 | 16 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
16 | NC_014674 | TTTTG | 3 | 66205 | 66219 | 15 | 0 % | 80 % | 20 % | 0 % | 6 % | Non-Coding |
17 | NC_014674 | TTTAA | 4 | 73270 | 73288 | 19 | 40 % | 60 % | 0 % | 0 % | 10 % | Non-Coding |
18 | NC_014674 | ATTTC | 3 | 77607 | 77620 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 31318401 |
19 | NC_014674 | CATAA | 3 | 78190 | 78205 | 16 | 60 % | 20 % | 0 % | 20 % | 6 % | 31318401 |
20 | NC_014674 | AAAAT | 3 | 81545 | 81559 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 31318401 |
21 | NC_014674 | ATTTT | 3 | 90403 | 90417 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 31318401 |
22 | NC_014674 | ATATG | 3 | 92368 | 92382 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 31318401 |
23 | NC_014674 | TTTCG | 3 | 103163 | 103176 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 31318401 |
24 | NC_014674 | GCAAT | 3 | 105407 | 105421 | 15 | 40 % | 20 % | 20 % | 20 % | 0 % | 31318405 |
25 | NC_014674 | TTCAA | 3 | 118921 | 118934 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | 31318405 |
26 | NC_014674 | TCCTT | 3 | 133380 | 133394 | 15 | 0 % | 60 % | 0 % | 40 % | 6 % | 31318405 |
27 | NC_014674 | CATTG | 3 | 145810 | 145824 | 15 | 20 % | 40 % | 20 % | 20 % | 0 % | 31318405 |