Tetra-nucleotide Imperfect Repeats of Castanea mollissima chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_014674 | GTAT | 3 | 101 | 111 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 2 | NC_014674 | TAAA | 4 | 219 | 234 | 16 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 3 | NC_014674 | AAGT | 3 | 1202 | 1212 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 31318397 |
| 4 | NC_014674 | CATT | 3 | 2754 | 2765 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 31318397 |
| 5 | NC_014674 | ATAA | 7 | 4658 | 4685 | 28 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 6 | NC_014674 | AAAC | 3 | 6450 | 6462 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 31318397 |
| 7 | NC_014674 | TCAA | 3 | 7352 | 7363 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 8 | NC_014674 | CCTT | 3 | 7410 | 7422 | 13 | 0 % | 50 % | 0 % | 50 % | 7 % | Non-Coding |
| 9 | NC_014674 | ATTT | 3 | 7940 | 7950 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 10 | NC_014674 | ATCT | 3 | 9094 | 9104 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 11 | NC_014674 | TTCT | 3 | 9181 | 9192 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 31318397 |
| 12 | NC_014674 | ATAA | 3 | 9249 | 9259 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 31318397 |
| 13 | NC_014674 | AAAT | 3 | 9900 | 9912 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 14 | NC_014674 | TAAA | 3 | 10305 | 10316 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 15 | NC_014674 | TTTA | 3 | 10329 | 10340 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_014674 | TTTA | 3 | 14222 | 14233 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 31318397 |
| 17 | NC_014674 | AAAT | 3 | 15559 | 15570 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_014674 | ATTT | 3 | 17666 | 17677 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_014674 | GAAT | 3 | 21125 | 21135 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 31318398 |
| 20 | NC_014674 | TTCA | 3 | 24860 | 24871 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 31318398 |
| 21 | NC_014674 | CCTA | 3 | 26815 | 26825 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 31318398 |
| 22 | NC_014674 | TTTG | 4 | 30821 | 30836 | 16 | 0 % | 75 % | 25 % | 0 % | 6 % | Non-Coding |
| 23 | NC_014674 | AAGA | 3 | 33219 | 33230 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 24 | NC_014674 | ATAA | 5 | 33686 | 33706 | 21 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_014674 | TTCA | 5 | 35010 | 35029 | 20 | 25 % | 50 % | 0 % | 25 % | 5 % | Non-Coding |
| 26 | NC_014674 | ATTT | 5 | 35848 | 35867 | 20 | 25 % | 75 % | 0 % | 0 % | 10 % | Non-Coding |
| 27 | NC_014674 | TGAA | 3 | 36050 | 36060 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 28 | NC_014674 | GAAA | 3 | 38768 | 38779 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 31318398 |
| 29 | NC_014674 | TTGC | 3 | 39169 | 39179 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 31318398 |
| 30 | NC_014674 | AATT | 3 | 40874 | 40885 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_014674 | AATG | 3 | 45101 | 45112 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 31318399 |
| 32 | NC_014674 | TACT | 3 | 47066 | 47076 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_014674 | CTTT | 3 | 48350 | 48361 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 31318399 |
| 34 | NC_014674 | ATTT | 3 | 51590 | 51600 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 35 | NC_014674 | AATA | 3 | 52500 | 52511 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_014674 | TTTA | 3 | 52992 | 53003 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 37 | NC_014674 | GTCT | 3 | 55602 | 55613 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 31318399 |
| 38 | NC_014674 | TATT | 4 | 56692 | 56707 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 39 | NC_014674 | TGCA | 3 | 61474 | 61486 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 31318400 |
| 40 | NC_014674 | TAAA | 4 | 62170 | 62185 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 41 | NC_014674 | TTCC | 3 | 64408 | 64418 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 42 | NC_014674 | AAGA | 3 | 68955 | 68965 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 43 | NC_014674 | CTTT | 4 | 70562 | 70576 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 44 | NC_014674 | TGTT | 3 | 70823 | 70833 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 45 | NC_014674 | AGTA | 3 | 70888 | 70898 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 46 | NC_014674 | TAAT | 3 | 72080 | 72091 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 31318401 |
| 47 | NC_014674 | ATTA | 5 | 72676 | 72694 | 19 | 50 % | 50 % | 0 % | 0 % | 5 % | Non-Coding |
| 48 | NC_014674 | TGAA | 3 | 74887 | 74898 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 49 | NC_014674 | TTAT | 3 | 75983 | 75993 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 31318401 |
| 50 | NC_014674 | TTTA | 4 | 76511 | 76526 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 31318401 |
| 51 | NC_014674 | ATTT | 3 | 85766 | 85777 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 31318401 |
| 52 | NC_014674 | CTTT | 3 | 86606 | 86616 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 31318401 |
| 53 | NC_014674 | CAAT | 3 | 89006 | 89016 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 31318401 |
| 54 | NC_014674 | TTCT | 3 | 94114 | 94124 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 31318401 |
| 55 | NC_014674 | CTTT | 3 | 95304 | 95314 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 31318401 |
| 56 | NC_014674 | TGAT | 3 | 97135 | 97147 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 31318401 |
| 57 | NC_014674 | TGAT | 3 | 97177 | 97189 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 31318401 |
| 58 | NC_014674 | AATA | 3 | 97991 | 98003 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 31318401 |
| 59 | NC_014674 | AGAT | 3 | 102459 | 102469 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 31318401 |
| 60 | NC_014674 | ATTT | 3 | 104817 | 104828 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 31318405 |
| 61 | NC_014674 | TTCT | 3 | 104835 | 104845 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 31318405 |
| 62 | NC_014674 | ATCC | 3 | 108528 | 108539 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 31318405 |
| 63 | NC_014674 | AAGG | 3 | 109068 | 109078 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 31318405 |
| 64 | NC_014674 | GAGG | 3 | 111783 | 111794 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 31318405 |
| 65 | NC_014674 | AGGT | 3 | 111995 | 112006 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 31318405 |
| 66 | NC_014674 | TAAG | 3 | 113115 | 113125 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 31318405 |
| 67 | NC_014674 | AAAT | 3 | 117705 | 117715 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 31318405 |
| 68 | NC_014674 | TTCT | 3 | 118623 | 118634 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 31318405 |
| 69 | NC_014674 | GTTA | 3 | 118765 | 118777 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 31318405 |
| 70 | NC_014674 | AAAT | 4 | 119472 | 119487 | 16 | 75 % | 25 % | 0 % | 0 % | 0 % | 31318405 |
| 71 | NC_014674 | TTAT | 3 | 120268 | 120278 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 31318405 |
| 72 | NC_014674 | ATTT | 3 | 120441 | 120453 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 31318405 |
| 73 | NC_014674 | ATTT | 3 | 122110 | 122120 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 31318405 |
| 74 | NC_014674 | ATGA | 3 | 124071 | 124082 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 31318405 |
| 75 | NC_014674 | TTAA | 3 | 125428 | 125440 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 31318405 |
| 76 | NC_014674 | ATTA | 3 | 127124 | 127134 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 31318405 |
| 77 | NC_014674 | AATC | 3 | 127638 | 127649 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 31318405 |
| 78 | NC_014674 | TTAA | 3 | 127805 | 127816 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 31318405 |
| 79 | NC_014674 | GAAT | 3 | 127820 | 127830 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 31318405 |
| 80 | NC_014674 | AAGA | 3 | 132399 | 132410 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 31318405 |
| 81 | NC_014674 | AAGT | 3 | 132499 | 132511 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 31318405 |
| 82 | NC_014674 | AAAG | 3 | 133897 | 133908 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 31318405 |
| 83 | NC_014674 | AAAT | 3 | 134409 | 134420 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 31318405 |
| 84 | NC_014674 | GTAA | 3 | 134468 | 134479 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 31318405 |
| 85 | NC_014674 | CTTA | 3 | 138107 | 138117 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 31318405 |
| 86 | NC_014674 | GGAT | 3 | 142693 | 142704 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 31318405 |
| 87 | NC_014674 | AAAT | 3 | 146404 | 146415 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 31318405 |
| 88 | NC_014674 | AAAG | 3 | 155918 | 155928 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 31318405 |
| 89 | NC_014674 | GTAA | 3 | 156949 | 156960 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 31318405 |
| 90 | NC_014674 | TATT | 3 | 156980 | 156991 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 31318405 |