Tetra-nucleotide Imperfect Repeats of Cedrus deodara chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_014575 | ATTC | 3 | 2195 | 2206 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 30932228 |
| 2 | NC_014575 | TCGT | 3 | 10644 | 10654 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 30932230 |
| 3 | NC_014575 | AGTT | 3 | 10914 | 10924 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 30932230 |
| 4 | NC_014575 | AATT | 3 | 14304 | 14314 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 30932230 |
| 5 | NC_014575 | CAAG | 3 | 17209 | 17219 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 6 | NC_014575 | ATAG | 3 | 21619 | 21630 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 30932230 |
| 7 | NC_014575 | ATAA | 3 | 22635 | 22646 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_014575 | TTTC | 3 | 30268 | 30279 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 30932231 |
| 9 | NC_014575 | ATCC | 3 | 35719 | 35730 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 10 | NC_014575 | GAGG | 3 | 38974 | 38985 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 11 | NC_014575 | AGGT | 3 | 39185 | 39196 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
| 12 | NC_014575 | AACC | 3 | 40812 | 40824 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | Non-Coding |
| 13 | NC_014575 | GTTC | 4 | 46438 | 46453 | 16 | 0 % | 50 % | 25 % | 25 % | 6 % | 30932231 |
| 14 | NC_014575 | TAGA | 3 | 48018 | 48029 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30932231 |
| 15 | NC_014575 | TTCT | 3 | 50741 | 50751 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 16 | NC_014575 | GGAT | 3 | 51900 | 51911 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 17 | NC_014575 | AATT | 3 | 55398 | 55409 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_014575 | TTCA | 3 | 56473 | 56484 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 19 | NC_014575 | TTCA | 3 | 57194 | 57206 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 20 | NC_014575 | AAAT | 3 | 58559 | 58569 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 21 | NC_014575 | TTTG | 3 | 66072 | 66083 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 30932235 |
| 22 | NC_014575 | CAAC | 4 | 69027 | 69042 | 16 | 50 % | 0 % | 0 % | 50 % | 6 % | 30932235 |
| 23 | NC_014575 | ATTT | 3 | 71019 | 71029 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 30932235 |
| 24 | NC_014575 | GATG | 3 | 71343 | 71355 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 30932235 |
| 25 | NC_014575 | AGAT | 3 | 73168 | 73179 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30932235 |
| 26 | NC_014575 | CCTT | 3 | 75986 | 75996 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 30932235 |
| 27 | NC_014575 | CTAT | 3 | 78236 | 78247 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 30932235 |
| 28 | NC_014575 | AAGT | 3 | 79229 | 79240 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30932235 |
| 29 | NC_014575 | GTCT | 3 | 80962 | 80973 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 30932235 |
| 30 | NC_014575 | TTGG | 3 | 82540 | 82551 | 12 | 0 % | 50 % | 50 % | 0 % | 0 % | 30932235 |
| 31 | NC_014575 | ATTT | 3 | 82756 | 82768 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 30932235 |
| 32 | NC_014575 | ATTT | 3 | 87136 | 87148 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 30932235 |
| 33 | NC_014575 | GCTT | 3 | 89858 | 89868 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 30932235 |
| 34 | NC_014575 | AAGT | 3 | 90822 | 90832 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 30932235 |
| 35 | NC_014575 | ATGA | 3 | 95869 | 95880 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30932235 |
| 36 | NC_014575 | ATCC | 3 | 96097 | 96107 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 30932235 |
| 37 | NC_014575 | CCCA | 3 | 97922 | 97933 | 12 | 25 % | 0 % | 0 % | 75 % | 0 % | 30932235 |
| 38 | NC_014575 | TAAA | 3 | 99124 | 99134 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 30932235 |
| 39 | NC_014575 | AATT | 3 | 99716 | 99727 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 30932235 |
| 40 | NC_014575 | GATA | 3 | 106577 | 106588 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 30932235 |
| 41 | NC_014575 | TTAA | 3 | 108489 | 108500 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 30932235 |
| 42 | NC_014575 | TCAT | 3 | 110056 | 110067 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 30932235 |
| 43 | NC_014575 | GAAA | 3 | 110191 | 110201 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 30932235 |
| 44 | NC_014575 | ATCT | 3 | 115799 | 115809 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 30932235 |