Tetra-nucleotide Imperfect Repeats of Oncidium Gower Ramsey chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_014056 | AAGA | 3 | 4483 | 4493 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 2 | NC_014056 | ATTT | 3 | 6339 | 6349 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_014056 | GTTT | 3 | 6459 | 6470 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 4 | NC_014056 | CTAT | 3 | 9817 | 9828 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_014056 | GTCT | 3 | 10953 | 10964 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 295311717 |
| 6 | NC_014056 | AAAG | 3 | 12270 | 12280 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 295311718 |
| 7 | NC_014056 | AATA | 3 | 12762 | 12773 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 295311718 |
| 8 | NC_014056 | TTCA | 3 | 21775 | 21786 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 295311723 |
| 9 | NC_014056 | TTTA | 3 | 21799 | 21809 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 295311723 |
| 10 | NC_014056 | GAAA | 3 | 25410 | 25422 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 295311724 |
| 11 | NC_014056 | AGCT | 3 | 26628 | 26639 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 12 | NC_014056 | TCTA | 3 | 26711 | 26721 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 13 | NC_014056 | AAGT | 3 | 27696 | 27706 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 14 | NC_014056 | ATTT | 3 | 28002 | 28013 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 15 | NC_014056 | TACT | 3 | 29251 | 29262 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 16 | NC_014056 | AGTA | 3 | 29840 | 29850 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_014056 | AAAG | 3 | 29953 | 29964 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_014056 | TAAA | 3 | 31999 | 32010 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_014056 | GAAA | 3 | 34124 | 34135 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 295311728 |
| 20 | NC_014056 | TTTG | 3 | 36815 | 36825 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 21 | NC_014056 | ACAA | 3 | 36836 | 36847 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 22 | NC_014056 | AAGA | 3 | 39328 | 39339 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 295311732 |
| 23 | NC_014056 | AATG | 3 | 39727 | 39738 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 295311732 |
| 24 | NC_014056 | AAGA | 3 | 42531 | 42541 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 295311733 |
| 25 | NC_014056 | AAAT | 3 | 45753 | 45764 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 26 | NC_014056 | TTGA | 3 | 46502 | 46514 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 27 | NC_014056 | GAAA | 3 | 46720 | 46732 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 28 | NC_014056 | GGAA | 3 | 47950 | 47962 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | Non-Coding |
| 29 | NC_014056 | ACTT | 3 | 49101 | 49111 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_014056 | TAAA | 3 | 49499 | 49509 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_014056 | ATTT | 3 | 53145 | 53156 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_014056 | TTCA | 3 | 53388 | 53398 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_014056 | AAAT | 3 | 57249 | 57260 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_014056 | GAAA | 3 | 60753 | 60765 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 295311742 |
| 35 | NC_014056 | AATC | 3 | 63060 | 63071 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 36 | NC_014056 | AAGA | 3 | 63287 | 63299 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 37 | NC_014056 | GAAT | 3 | 63318 | 63328 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 38 | NC_014056 | TCAA | 3 | 64997 | 65008 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 39 | NC_014056 | ATTA | 4 | 65289 | 65303 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 40 | NC_014056 | TTCT | 3 | 65506 | 65517 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 41 | NC_014056 | GAAA | 3 | 65779 | 65790 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 295311749 |
| 42 | NC_014056 | TAAA | 3 | 65896 | 65907 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_014056 | TCTT | 3 | 66400 | 66411 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_014056 | AAAG | 3 | 67132 | 67142 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 45 | NC_014056 | TTTA | 3 | 68329 | 68340 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 295311779 |
| 46 | NC_014056 | GTTG | 3 | 71664 | 71675 | 12 | 0 % | 50 % | 50 % | 0 % | 0 % | 295311779 |
| 47 | NC_014056 | TTTC | 3 | 72585 | 72596 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 295311779 |
| 48 | NC_014056 | CATC | 3 | 74908 | 74919 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 295311779 |
| 49 | NC_014056 | AATG | 3 | 75395 | 75405 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 295311779 |
| 50 | NC_014056 | AATC | 4 | 76595 | 76610 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 295311779 |
| 51 | NC_014056 | GAAA | 3 | 79499 | 79509 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 295311779 |
| 52 | NC_014056 | TTCT | 3 | 80826 | 80837 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 295311779 |
| 53 | NC_014056 | GCAA | 3 | 85360 | 85370 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 295311779 |
| 54 | NC_014056 | TTCT | 3 | 86646 | 86656 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 295311779 |
| 55 | NC_014056 | TTTC | 3 | 86933 | 86944 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 295311779 |
| 56 | NC_014056 | TGAT | 3 | 89463 | 89475 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 295311779 |
| 57 | NC_014056 | AATA | 3 | 90346 | 90358 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 295311779 |
| 58 | NC_014056 | TTTC | 3 | 90408 | 90419 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 295311779 |
| 59 | NC_014056 | TCTA | 3 | 92581 | 92592 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 295311779 |
| 60 | NC_014056 | AAAT | 3 | 95248 | 95258 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 295311779 |
| 61 | NC_014056 | TTTC | 3 | 97654 | 97664 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 295311785 |
| 62 | NC_014056 | ATCC | 3 | 101494 | 101505 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 295311785 |
| 63 | NC_014056 | TCTA | 3 | 101881 | 101892 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 295311785 |
| 64 | NC_014056 | GAGG | 3 | 104720 | 104731 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 295311785 |
| 65 | NC_014056 | AGGT | 3 | 104932 | 104943 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 295311785 |
| 66 | NC_014056 | TAAG | 3 | 106052 | 106062 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 295311785 |
| 67 | NC_014056 | ATTC | 3 | 107438 | 107448 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 295311785 |
| 68 | NC_014056 | ATGA | 3 | 107453 | 107463 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 295311785 |
| 69 | NC_014056 | GGAA | 3 | 108017 | 108027 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 295311785 |
| 70 | NC_014056 | TTTA | 3 | 108299 | 108310 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 295311785 |
| 71 | NC_014056 | TTCT | 4 | 108332 | 108347 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 295311785 |
| 72 | NC_014056 | TAGA | 3 | 110820 | 110830 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 295311785 |
| 73 | NC_014056 | TTTC | 3 | 113965 | 113975 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 295311785 |
| 74 | NC_014056 | TTCA | 4 | 115330 | 115344 | 15 | 25 % | 50 % | 0 % | 25 % | 6 % | 295311785 |
| 75 | NC_014056 | TATT | 3 | 116035 | 116045 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 295311785 |
| 76 | NC_014056 | AATT | 3 | 116443 | 116454 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 295311785 |
| 77 | NC_014056 | TTAT | 3 | 117021 | 117032 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 295311785 |
| 78 | NC_014056 | GAAT | 3 | 117119 | 117130 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 295311785 |
| 79 | NC_014056 | CATT | 3 | 117281 | 117292 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 295311785 |
| 80 | NC_014056 | CTTT | 3 | 119489 | 119500 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 295311785 |
| 81 | NC_014056 | CTTT | 4 | 120169 | 120184 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 295311785 |
| 82 | NC_014056 | TTCC | 3 | 120782 | 120792 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 295311785 |
| 83 | NC_014056 | ATGA | 3 | 121355 | 121366 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 295311785 |
| 84 | NC_014056 | ATTT | 3 | 122126 | 122136 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 295311785 |
| 85 | NC_014056 | CTTA | 3 | 122747 | 122757 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 295311785 |
| 86 | NC_014056 | GGAT | 3 | 127304 | 127315 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 295311785 |
| 87 | NC_014056 | ATTT | 3 | 133551 | 133561 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 88 | NC_014056 | TAGA | 3 | 136217 | 136228 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 89 | NC_014056 | TGAA | 3 | 138389 | 138400 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 295311775 |
| 90 | NC_014056 | ATCA | 3 | 139334 | 139346 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 295311775 |
| 91 | NC_014056 | GAAA | 3 | 141865 | 141880 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 295311775 |
| 92 | NC_014056 | ATTT | 3 | 142026 | 142037 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 295311775 |
| 93 | NC_014056 | TTGC | 3 | 143439 | 143449 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 295311775 |
| 94 | NC_014056 | CATT | 3 | 145902 | 145912 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |