Penta-nucleotide Imperfect Repeats of Vigna radiata chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_013843 | AAAAG | 3 | 1031 | 1044 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 289066806 |
2 | NC_013843 | AATAA | 3 | 7303 | 7317 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
3 | NC_013843 | TTCTT | 3 | 32942 | 32955 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
4 | NC_013843 | TTTCT | 3 | 33430 | 33443 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
5 | NC_013843 | AAAGG | 3 | 33959 | 33972 | 14 | 60 % | 0 % | 40 % | 0 % | 7 % | Non-Coding |
6 | NC_013843 | TAGAA | 3 | 34783 | 34797 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
7 | NC_013843 | ATTCA | 3 | 49795 | 49810 | 16 | 40 % | 40 % | 0 % | 20 % | 6 % | Non-Coding |
8 | NC_013843 | AAATA | 3 | 54584 | 54598 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
9 | NC_013843 | CTTAT | 3 | 56615 | 56629 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
10 | NC_013843 | TAAAA | 4 | 60401 | 60421 | 21 | 80 % | 20 % | 0 % | 0 % | 4 % | 289066836 |
11 | NC_013843 | TGAAA | 3 | 65707 | 65721 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
12 | NC_013843 | TCTTT | 3 | 74063 | 74076 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 289066850 |
13 | NC_013843 | ATAAA | 3 | 76474 | 76488 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 289066850 |
14 | NC_013843 | TTTCG | 3 | 94778 | 94791 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 289066850 |
15 | NC_013843 | ATCTT | 3 | 110482 | 110495 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 289066880 |
16 | NC_013843 | TTAAA | 3 | 120861 | 120876 | 16 | 60 % | 40 % | 0 % | 0 % | 6 % | 289066880 |
17 | NC_013843 | GTAAA | 3 | 121026 | 121039 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 289066880 |
18 | NC_013843 | TTATT | 3 | 121637 | 121651 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 289066880 |
19 | NC_013843 | TTCTT | 3 | 122714 | 122727 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 289066880 |
20 | NC_013843 | TTTTC | 3 | 131056 | 131070 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 289066880 |
21 | NC_013843 | AATTC | 3 | 150776 | 150789 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
22 | NC_013843 | TCAAT | 3 | 150836 | 150849 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |