Tetra-nucleotide Imperfect Repeats of Vigna radiata chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_013843 | ATTT | 3 | 774 | 785 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 2 | NC_013843 | TAAA | 3 | 803 | 814 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_013843 | AAAG | 3 | 976 | 986 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 289066806 |
| 4 | NC_013843 | AATA | 3 | 991 | 1002 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289066806 |
| 5 | NC_013843 | GAAA | 3 | 1272 | 1282 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 289066806 |
| 6 | NC_013843 | AAAT | 3 | 2790 | 2801 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_013843 | AAGT | 3 | 3970 | 3980 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 289066808 |
| 8 | NC_013843 | ATAA | 3 | 5601 | 5612 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289066809 |
| 9 | NC_013843 | TTTA | 3 | 6707 | 6718 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_013843 | AAAG | 3 | 6934 | 6946 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 11 | NC_013843 | GAAA | 3 | 8042 | 8053 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_013843 | CAAA | 3 | 14037 | 14048 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 289066814 |
| 13 | NC_013843 | TAAA | 3 | 15698 | 15709 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 14 | NC_013843 | AAAT | 3 | 17775 | 17785 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 15 | NC_013843 | AAAG | 3 | 20597 | 20608 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 289066817 |
| 16 | NC_013843 | TTTC | 3 | 20872 | 20883 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 289066817 |
| 17 | NC_013843 | TTTC | 3 | 21160 | 21171 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 18 | NC_013843 | TCTT | 3 | 23884 | 23895 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 289066818 |
| 19 | NC_013843 | TCTA | 3 | 27369 | 27380 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 20 | NC_013843 | TAAA | 3 | 28637 | 28648 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 21 | NC_013843 | AAGC | 3 | 29234 | 29244 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 289066822 |
| 22 | NC_013843 | TTTC | 3 | 31595 | 31605 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 23 | NC_013843 | TTCA | 3 | 33551 | 33562 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 24 | NC_013843 | AATT | 3 | 41284 | 41295 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 289066827 |
| 25 | NC_013843 | ACAA | 3 | 43131 | 43142 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 289066827 |
| 26 | NC_013843 | ATTC | 3 | 45177 | 45187 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 289066828 |
| 27 | NC_013843 | ATCT | 3 | 46575 | 46587 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 289066828 |
| 28 | NC_013843 | GAAA | 3 | 47816 | 47828 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 29 | NC_013843 | TACT | 3 | 48919 | 48929 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 289066830 |
| 30 | NC_013843 | CTTT | 3 | 50971 | 50983 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 31 | NC_013843 | AATT | 3 | 52253 | 52265 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 289066832 |
| 32 | NC_013843 | AAAT | 3 | 52466 | 52477 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289066832 |
| 33 | NC_013843 | AAAT | 3 | 55397 | 55408 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_013843 | AAAG | 3 | 56744 | 56754 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 289066835 |
| 35 | NC_013843 | CTAT | 3 | 57189 | 57200 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 36 | NC_013843 | AGAA | 3 | 58027 | 58037 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_013843 | TTAT | 3 | 58739 | 58751 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 38 | NC_013843 | ATTT | 3 | 58838 | 58849 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 39 | NC_013843 | AAAT | 3 | 60367 | 60377 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 289066836 |
| 40 | NC_013843 | CAAA | 3 | 60702 | 60713 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 289066837 |
| 41 | NC_013843 | AAAG | 3 | 61216 | 61226 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 289066838 |
| 42 | NC_013843 | TGAT | 3 | 65955 | 65966 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 43 | NC_013843 | TCAA | 3 | 69137 | 69148 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_013843 | AGAA | 3 | 72155 | 72165 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 289066850 |
| 45 | NC_013843 | ATTT | 3 | 72226 | 72237 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 289066850 |
| 46 | NC_013843 | TAAA | 3 | 74533 | 74544 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289066850 |
| 47 | NC_013843 | AAAT | 3 | 75441 | 75452 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289066850 |
| 48 | NC_013843 | ATTT | 3 | 76426 | 76436 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 289066850 |
| 49 | NC_013843 | CCAA | 3 | 76692 | 76702 | 11 | 50 % | 0 % | 0 % | 50 % | 9 % | 289066850 |
| 50 | NC_013843 | TTTA | 3 | 77154 | 77164 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 289066850 |
| 51 | NC_013843 | TGGA | 3 | 77285 | 77295 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 289066850 |
| 52 | NC_013843 | TTAA | 3 | 79974 | 79985 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 289066850 |
| 53 | NC_013843 | GACT | 3 | 82502 | 82513 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 289066850 |
| 54 | NC_013843 | TTCT | 3 | 83743 | 83753 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 289066850 |
| 55 | NC_013843 | GAAA | 3 | 83867 | 83879 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 289066850 |
| 56 | NC_013843 | TTCT | 3 | 85691 | 85701 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 289066850 |
| 57 | NC_013843 | GAAA | 3 | 85815 | 85827 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 289066850 |
| 58 | NC_013843 | TGAT | 3 | 88724 | 88736 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 289066850 |
| 59 | NC_013843 | TTGA | 3 | 90469 | 90481 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 289066850 |
| 60 | NC_013843 | ACTT | 3 | 90767 | 90777 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 289066850 |
| 61 | NC_013843 | AGAT | 3 | 94072 | 94082 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 289066850 |
| 62 | NC_013843 | CTTT | 4 | 96606 | 96620 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 289066880 |
| 63 | NC_013843 | GGGC | 3 | 98145 | 98156 | 12 | 0 % | 0 % | 75 % | 25 % | 8 % | 289066880 |
| 64 | NC_013843 | TCTA | 3 | 100765 | 100776 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 289066880 |
| 65 | NC_013843 | GAGG | 3 | 103654 | 103665 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 289066880 |
| 66 | NC_013843 | AGGT | 3 | 103866 | 103877 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 289066880 |
| 67 | NC_013843 | TCTA | 3 | 106773 | 106785 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 289066880 |
| 68 | NC_013843 | CCAC | 3 | 107430 | 107440 | 11 | 25 % | 0 % | 0 % | 75 % | 9 % | 289066880 |
| 69 | NC_013843 | TGAA | 3 | 108173 | 108185 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 289066880 |
| 70 | NC_013843 | AAAT | 3 | 111416 | 111426 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 289066880 |
| 71 | NC_013843 | AAAT | 4 | 111717 | 111732 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 289066880 |
| 72 | NC_013843 | TATT | 4 | 111766 | 111780 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | 289066880 |
| 73 | NC_013843 | AATA | 3 | 111989 | 112000 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 289066880 |
| 74 | NC_013843 | ATGA | 3 | 113754 | 113765 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 289066880 |
| 75 | NC_013843 | TGAT | 3 | 113973 | 113984 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 289066880 |
| 76 | NC_013843 | CAAT | 3 | 115514 | 115524 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 289066880 |
| 77 | NC_013843 | AAAG | 3 | 116935 | 116946 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 289066880 |
| 78 | NC_013843 | ATAA | 3 | 119763 | 119774 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289066880 |
| 79 | NC_013843 | TGAA | 3 | 120569 | 120580 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 289066880 |
| 80 | NC_013843 | ATTT | 3 | 120669 | 120679 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 289066880 |
| 81 | NC_013843 | TCTT | 3 | 120955 | 120966 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 289066880 |
| 82 | NC_013843 | GAAA | 3 | 122055 | 122066 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 289066880 |
| 83 | NC_013843 | AATA | 3 | 122416 | 122427 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289066880 |
| 84 | NC_013843 | ATTT | 3 | 124146 | 124157 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 289066880 |
| 85 | NC_013843 | TCTT | 3 | 124456 | 124466 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 289066880 |
| 86 | NC_013843 | TAAA | 3 | 124585 | 124597 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 289066880 |
| 87 | NC_013843 | TTCC | 3 | 125130 | 125140 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 289066880 |
| 88 | NC_013843 | TCGG | 3 | 128055 | 128065 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 289066880 |
| 89 | NC_013843 | GCCC | 3 | 134014 | 134025 | 12 | 0 % | 0 % | 25 % | 75 % | 8 % | 289066880 |
| 90 | NC_013843 | TCAA | 3 | 141689 | 141701 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 289066883 |
| 91 | NC_013843 | AAAG | 3 | 145297 | 145307 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 289066883 |