Tetra-nucleotide Imperfect Repeats of Typha latifolia chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_013823 | AAGT | 3 | 785 | 795 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 289065069 |
| 2 | NC_013823 | TAGA | 3 | 1218 | 1228 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 3 | NC_013823 | ATGG | 3 | 2735 | 2747 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 289065070 |
| 4 | NC_013823 | AAAT | 3 | 3905 | 3915 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_013823 | AAAT | 3 | 4110 | 4121 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_013823 | ATTT | 3 | 6122 | 6132 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_013823 | TTCT | 3 | 7673 | 7683 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 289065072 |
| 8 | NC_013823 | TTAA | 3 | 8008 | 8019 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_013823 | TAAA | 3 | 9647 | 9659 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 10 | NC_013823 | TTTA | 3 | 10037 | 10049 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 11 | NC_013823 | CAAT | 3 | 15318 | 15330 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 12 | NC_013823 | GATA | 4 | 15509 | 15523 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 13 | NC_013823 | TCAA | 3 | 18128 | 18139 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 289065079 |
| 14 | NC_013823 | TTCA | 3 | 24023 | 24034 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 289065080 |
| 15 | NC_013823 | GAAA | 3 | 27619 | 27631 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 289065081 |
| 16 | NC_013823 | CTAT | 3 | 28843 | 28854 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 17 | NC_013823 | TATT | 3 | 28926 | 28936 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 18 | NC_013823 | ATTT | 3 | 30738 | 30749 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_013823 | TTTC | 5 | 30751 | 30771 | 21 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_013823 | GAAA | 3 | 31329 | 31340 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_013823 | AAAG | 3 | 32783 | 32794 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 22 | NC_013823 | TACA | 3 | 34317 | 34328 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 23 | NC_013823 | TAAA | 3 | 34530 | 34541 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_013823 | ACTT | 3 | 34630 | 34640 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 25 | NC_013823 | GAAA | 3 | 36983 | 36994 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 289065085 |
| 26 | NC_013823 | AAAT | 3 | 39987 | 39997 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_013823 | AATG | 3 | 42866 | 42877 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 289065089 |
| 28 | NC_013823 | AAGA | 3 | 45615 | 45625 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 289065090 |
| 29 | NC_013823 | AATA | 3 | 49785 | 49796 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_013823 | AAAT | 4 | 50337 | 50352 | 16 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 31 | NC_013823 | TTGA | 3 | 50438 | 50450 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 32 | NC_013823 | TACA | 3 | 50704 | 50715 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 33 | NC_013823 | ATTT | 3 | 51818 | 51829 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_013823 | TATT | 3 | 51844 | 51856 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 35 | NC_013823 | TTGT | 3 | 54794 | 54804 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 36 | NC_013823 | ATAA | 3 | 60212 | 60222 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 37 | NC_013823 | TTTA | 3 | 60687 | 60698 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 38 | NC_013823 | AGAA | 3 | 60700 | 60711 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 39 | NC_013823 | TTTA | 3 | 63050 | 63060 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_013823 | ATTT | 3 | 63268 | 63278 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_013823 | TTTC | 3 | 65163 | 65174 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 42 | NC_013823 | AATG | 3 | 66272 | 66283 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 289065101 |
| 43 | NC_013823 | TTCA | 3 | 67981 | 67992 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_013823 | CTTT | 3 | 69593 | 69603 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 45 | NC_013823 | GAAA | 3 | 70026 | 70036 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 46 | NC_013823 | AAAT | 3 | 72844 | 72855 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289065110 |
| 47 | NC_013823 | TTTC | 3 | 74048 | 74060 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 48 | NC_013823 | TTTC | 3 | 76291 | 76302 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 289065113 |
| 49 | NC_013823 | AAAT | 3 | 80504 | 80514 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 289065113 |
| 50 | NC_013823 | CTTT | 3 | 83000 | 83010 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 289065113 |
| 51 | NC_013823 | AGAA | 3 | 86337 | 86348 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 289065113 |
| 52 | NC_013823 | GAAT | 3 | 87208 | 87219 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 289065113 |
| 53 | NC_013823 | TTCT | 3 | 87602 | 87613 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 289065113 |
| 54 | NC_013823 | TTCA | 3 | 87717 | 87728 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 289065113 |
| 55 | NC_013823 | ATTT | 3 | 87954 | 87965 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 289065113 |
| 56 | NC_013823 | TTTA | 3 | 92525 | 92536 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 289065113 |
| 57 | NC_013823 | TTCT | 3 | 93352 | 93362 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 289065113 |
| 58 | NC_013823 | TGAT | 3 | 96367 | 96379 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 289065113 |
| 59 | NC_013823 | TGAT | 3 | 96409 | 96421 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 289065113 |
| 60 | NC_013823 | AATA | 3 | 97280 | 97292 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 289065113 |
| 61 | NC_013823 | TTTC | 3 | 97342 | 97353 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 289065113 |
| 62 | NC_013823 | AAAG | 3 | 99362 | 99374 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 289065113 |
| 63 | NC_013823 | TCTA | 3 | 99552 | 99563 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 289065113 |
| 64 | NC_013823 | AAAT | 3 | 105505 | 105516 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 289065148 |
| 65 | NC_013823 | AAAT | 6 | 105519 | 105542 | 24 | 75 % | 25 % | 0 % | 0 % | 8 % | 289065148 |
| 66 | NC_013823 | ATCC | 3 | 108532 | 108543 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 289065148 |
| 67 | NC_013823 | TCTA | 3 | 108920 | 108931 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 289065148 |
| 68 | NC_013823 | GAGG | 3 | 111772 | 111783 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 289065148 |
| 69 | NC_013823 | AGGT | 3 | 111984 | 111995 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 289065148 |
| 70 | NC_013823 | TAAG | 3 | 113104 | 113114 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 289065148 |
| 71 | NC_013823 | GGAA | 3 | 115139 | 115149 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 289065148 |
| 72 | NC_013823 | ATTT | 3 | 116394 | 116404 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 289065148 |
| 73 | NC_013823 | AAAT | 3 | 118594 | 118604 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 289065148 |
| 74 | NC_013823 | AGAA | 3 | 118976 | 118986 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 289065148 |
| 75 | NC_013823 | GAAA | 4 | 125206 | 125220 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 289065148 |
| 76 | NC_013823 | TTTC | 3 | 127006 | 127016 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 289065148 |
| 77 | NC_013823 | TGAA | 3 | 129728 | 129740 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 289065148 |
| 78 | NC_013823 | TTAA | 6 | 130166 | 130190 | 25 | 50 % | 50 % | 0 % | 0 % | 4 % | 289065148 |
| 79 | NC_013823 | TAAT | 5 | 130195 | 130214 | 20 | 50 % | 50 % | 0 % | 0 % | 5 % | 289065148 |
| 80 | NC_013823 | GATT | 3 | 131370 | 131381 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 289065148 |
| 81 | NC_013823 | TAAT | 3 | 131781 | 131792 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 289065148 |
| 82 | NC_013823 | TTCC | 3 | 135565 | 135575 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 289065148 |
| 83 | NC_013823 | CTTA | 3 | 137600 | 137610 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 289065148 |
| 84 | NC_013823 | CTAC | 3 | 138717 | 138728 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 289065148 |
| 85 | NC_013823 | GGAT | 3 | 142171 | 142182 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 289065148 |
| 86 | NC_013823 | TATT | 4 | 145175 | 145190 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 289065148 |
| 87 | NC_013823 | TAGA | 3 | 151151 | 151162 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 88 | NC_013823 | CTTT | 3 | 151340 | 151352 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 89 | NC_013823 | TGAA | 3 | 153360 | 153371 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 289065151 |
| 90 | NC_013823 | ATCA | 3 | 154335 | 154347 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 289065151 |
| 91 | NC_013823 | TGAT | 3 | 154430 | 154442 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 289065151 |
| 92 | NC_013823 | ATTT | 3 | 157225 | 157236 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 289065151 |
| 93 | NC_013823 | CATT | 3 | 161095 | 161105 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |