Hexa-nucleotide Imperfect Repeats of Oryza rufipogon mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_013816 | CTTTTT | 3 | 52425 | 52441 | 17 | 0 % | 83.33 % | 0 % | 16.67 % | 5 % | 28906502 |
| 2 | NC_013816 | TGGTGA | 3 | 61123 | 61140 | 18 | 16.67 % | 33.33 % | 50 % | 0 % | 5 % | Non-Coding |
| 3 | NC_013816 | AAATAA | 3 | 65403 | 65420 | 18 | 83.33 % | 16.67 % | 0 % | 0 % | 0 % | Non-Coding |
| 4 | NC_013816 | TATTGG | 3 | 72371 | 72388 | 18 | 16.67 % | 50 % | 33.33 % | 0 % | 5 % | Non-Coding |
| 5 | NC_013816 | AAAGAA | 3 | 80267 | 80285 | 19 | 83.33 % | 0 % | 16.67 % | 0 % | 10 % | Non-Coding |
| 6 | NC_013816 | TCAAAG | 3 | 101466 | 101482 | 17 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
| 7 | NC_013816 | GCTATG | 3 | 122113 | 122129 | 17 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 5 % | Non-Coding |
| 8 | NC_013816 | ACAATG | 3 | 133385 | 133402 | 18 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
| 9 | NC_013816 | TTTCTT | 3 | 140677 | 140695 | 19 | 0 % | 83.33 % | 0 % | 16.67 % | 10 % | Non-Coding |
| 10 | NC_013816 | GGGAGA | 3 | 170476 | 170494 | 19 | 33.33 % | 0 % | 66.67 % | 0 % | 10 % | Non-Coding |
| 11 | NC_013816 | CTTTTT | 3 | 241186 | 241202 | 17 | 0 % | 83.33 % | 0 % | 16.67 % | 5 % | Non-Coding |
| 12 | NC_013816 | TGGTGA | 3 | 249883 | 249900 | 18 | 16.67 % | 33.33 % | 50 % | 0 % | 5 % | Non-Coding |
| 13 | NC_013816 | AAATAA | 3 | 254162 | 254179 | 18 | 83.33 % | 16.67 % | 0 % | 0 % | 0 % | Non-Coding |
| 14 | NC_013816 | CTAGCC | 3 | 274331 | 274347 | 17 | 16.67 % | 16.67 % | 16.67 % | 50 % | 5 % | Non-Coding |
| 15 | NC_013816 | GGCTAG | 3 | 431903 | 431919 | 17 | 16.67 % | 16.67 % | 50 % | 16.67 % | 5 % | Non-Coding |
| 16 | NC_013816 | ATTCTT | 3 | 461615 | 461632 | 18 | 16.67 % | 66.67 % | 0 % | 16.67 % | 5 % | Non-Coding |
| 17 | NC_013816 | AATTTC | 5 | 489757 | 489786 | 30 | 33.33 % | 50 % | 0 % | 16.67 % | 6 % | Non-Coding |
| 18 | NC_013816 | CCTATT | 3 | 499305 | 499322 | 18 | 16.67 % | 50 % | 0 % | 33.33 % | 5 % | Non-Coding |
| 19 | NC_013816 | ACAATG | 3 | 503667 | 503684 | 18 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
| 20 | NC_013816 | TTTCTT | 3 | 510959 | 510977 | 19 | 0 % | 83.33 % | 0 % | 16.67 % | 10 % | Non-Coding |
| 21 | NC_013816 | GGGAGA | 3 | 540758 | 540776 | 19 | 33.33 % | 0 % | 66.67 % | 0 % | 10 % | Non-Coding |