Penta-nucleotide Imperfect Repeats of Oryza rufipogon mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_013816 | AAAAG | 3 | 2381 | 2395 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
| 2 | NC_013816 | GTGGT | 3 | 10152 | 10165 | 14 | 0 % | 40 % | 60 % | 0 % | 7 % | Non-Coding |
| 3 | NC_013816 | CCTAT | 3 | 20395 | 20408 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
| 4 | NC_013816 | GGTAA | 3 | 57305 | 57320 | 16 | 40 % | 20 % | 40 % | 0 % | 6 % | 28906503 |
| 5 | NC_013816 | CAATT | 3 | 62397 | 62411 | 15 | 40 % | 40 % | 0 % | 20 % | 0 % | Non-Coding |
| 6 | NC_013816 | TTTAG | 3 | 63684 | 63697 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | Non-Coding |
| 7 | NC_013816 | AAAGA | 3 | 80694 | 80707 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
| 8 | NC_013816 | AAAAG | 3 | 82050 | 82064 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
| 9 | NC_013816 | CATTT | 3 | 96386 | 96400 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
| 10 | NC_013816 | AAAGG | 3 | 96499 | 96513 | 15 | 60 % | 0 % | 40 % | 0 % | 0 % | Non-Coding |
| 11 | NC_013816 | CTTTG | 3 | 100861 | 100875 | 15 | 0 % | 60 % | 20 % | 20 % | 6 % | Non-Coding |
| 12 | NC_013816 | TTTGA | 3 | 123671 | 123685 | 15 | 20 % | 60 % | 20 % | 0 % | 0 % | Non-Coding |
| 13 | NC_013816 | GAATG | 3 | 128339 | 128352 | 14 | 40 % | 20 % | 40 % | 0 % | 7 % | Non-Coding |
| 14 | NC_013816 | TTCTA | 3 | 129763 | 129777 | 15 | 20 % | 60 % | 0 % | 20 % | 0 % | Non-Coding |
| 15 | NC_013816 | GCCTA | 3 | 137075 | 137089 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | Non-Coding |
| 16 | NC_013816 | TAATT | 3 | 144699 | 144713 | 15 | 40 % | 60 % | 0 % | 0 % | 0 % | Non-Coding |
| 17 | NC_013816 | ATTCT | 3 | 157573 | 157586 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
| 18 | NC_013816 | CAAGA | 3 | 181206 | 181219 | 14 | 60 % | 0 % | 20 % | 20 % | 7 % | Non-Coding |
| 19 | NC_013816 | AAAAG | 3 | 191143 | 191157 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
| 20 | NC_013816 | GTGGT | 3 | 198913 | 198926 | 14 | 0 % | 40 % | 60 % | 0 % | 7 % | Non-Coding |
| 21 | NC_013816 | CCTAT | 3 | 209156 | 209169 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
| 22 | NC_013816 | GGTAA | 3 | 246065 | 246080 | 16 | 40 % | 20 % | 40 % | 0 % | 6 % | Non-Coding |
| 23 | NC_013816 | CAATT | 3 | 251157 | 251171 | 15 | 40 % | 40 % | 0 % | 20 % | 0 % | Non-Coding |
| 24 | NC_013816 | TTTAG | 3 | 252444 | 252457 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | Non-Coding |
| 25 | NC_013816 | CTGAT | 3 | 273074 | 273088 | 15 | 20 % | 40 % | 20 % | 20 % | 6 % | Non-Coding |
| 26 | NC_013816 | AGCCT | 3 | 287439 | 287453 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | Non-Coding |
| 27 | NC_013816 | ACTAT | 3 | 289507 | 289520 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
| 28 | NC_013816 | AAAAT | 3 | 303357 | 303371 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
| 29 | NC_013816 | TAAGG | 4 | 311876 | 311894 | 19 | 40 % | 20 % | 40 % | 0 % | 5 % | Non-Coding |
| 30 | NC_013816 | CATCA | 3 | 317490 | 317503 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |
| 31 | NC_013816 | GCCCG | 3 | 321734 | 321748 | 15 | 0 % | 0 % | 40 % | 60 % | 0 % | Non-Coding |
| 32 | NC_013816 | TAAGA | 4 | 327501 | 327519 | 19 | 60 % | 20 % | 20 % | 0 % | 5 % | Non-Coding |
| 33 | NC_013816 | GAAAA | 3 | 328526 | 328539 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
| 34 | NC_013816 | GGGAA | 3 | 337956 | 337970 | 15 | 40 % | 0 % | 60 % | 0 % | 6 % | Non-Coding |
| 35 | NC_013816 | AATAA | 4 | 344743 | 344761 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | 28906505 |
| 36 | NC_013816 | AGCCT | 3 | 355962 | 355976 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | Non-Coding |
| 37 | NC_013816 | ACTAT | 3 | 358030 | 358043 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
| 38 | NC_013816 | AAAAT | 3 | 371880 | 371893 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
| 39 | NC_013816 | TAAGG | 4 | 380398 | 380416 | 19 | 40 % | 20 % | 40 % | 0 % | 5 % | Non-Coding |
| 40 | NC_013816 | CATCA | 3 | 386012 | 386025 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |
| 41 | NC_013816 | GCCCG | 3 | 390256 | 390270 | 15 | 0 % | 0 % | 40 % | 60 % | 0 % | Non-Coding |
| 42 | NC_013816 | TAAGA | 4 | 396023 | 396041 | 19 | 60 % | 20 % | 20 % | 0 % | 5 % | Non-Coding |
| 43 | NC_013816 | GAAAA | 3 | 397048 | 397061 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
| 44 | NC_013816 | GGGAA | 3 | 406478 | 406492 | 15 | 40 % | 0 % | 60 % | 0 % | 6 % | Non-Coding |
| 45 | NC_013816 | AATAA | 4 | 413265 | 413283 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
| 46 | NC_013816 | TGGAT | 3 | 479897 | 479911 | 15 | 20 % | 40 % | 40 % | 0 % | 0 % | Non-Coding |
| 47 | NC_013816 | ACTCG | 3 | 484009 | 484023 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | Non-Coding |
| 48 | NC_013816 | CTTTT | 3 | 484624 | 484637 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
| 49 | NC_013816 | GCCTA | 3 | 507357 | 507371 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | Non-Coding |
| 50 | NC_013816 | TAATT | 3 | 514981 | 514995 | 15 | 40 % | 60 % | 0 % | 0 % | 0 % | Non-Coding |
| 51 | NC_013816 | ATTCT | 3 | 527855 | 527868 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
| 52 | NC_013816 | CAAGA | 3 | 551488 | 551501 | 14 | 60 % | 0 % | 20 % | 20 % | 7 % | Non-Coding |