ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

Tri-nucleotide Perfect Repeats of Oryza rufipogon mitochondrion

Click on Table Heading To Sort Results Accordingly

S.No.	Genome ID	Motif	Iterations	Start	End	Tract Length	A%	T%	G%	C%	Protein ID
1	NC_013816	AGA	4	26557	26568	12	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_013816	GAA	4	30576	30587	12	66.67 %	0 %	33.33 %	0 %	Non-Coding
3	NC_013816	AGT	4	71081	71092	12	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_013816	CAA	4	76601	76612	12	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_013816	TAG	4	97262	97273	12	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6	NC_013816	CTC	4	103801	103812	12	0 %	33.33 %	0 %	66.67 %	28906503
7	NC_013816	TTA	4	121334	121345	12	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_013816	ACA	4	150230	150241	12	66.67 %	0 %	0 %	33.33 %	Non-Coding
9	NC_013816	ATA	4	165245	165256	12	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_013816	AAT	4	179879	179890	12	66.67 %	33.33 %	0 %	0 %	28906504
11	NC_013816	AGA	4	215318	215329	12	66.67 %	0 %	33.33 %	0 %	Non-Coding
12	NC_013816	GAA	4	219337	219348	12	66.67 %	0 %	33.33 %	0 %	Non-Coding
13	NC_013816	AGT	4	259840	259851	12	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_013816	CTT	4	297516	297527	12	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_013816	AAT	4	339066	339077	12	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_013816	ACT	4	339974	339985	12	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_013816	CAA	4	340027	340038	12	66.67 %	0 %	0 %	33.33 %	Non-Coding
18	NC_013816	CTT	4	366039	366050	12	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_013816	AAT	4	407588	407599	12	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_013816	ACT	4	408496	408507	12	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_013816	CAA	4	408549	408560	12	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_013816	ACT	4	446399	446410	12	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23	NC_013816	ACA	4	520512	520523	12	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_013816	ATA	4	535527	535538	12	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_013816	AAT	4	550161	550172	12	66.67 %	33.33 %	0 %	0 %	Non-Coding

ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Tri-nucleotide Perfect Repeats of Oryza rufipogon mitochondrion