Tetra-nucleotide Imperfect Repeats of Coix lacryma-jobi chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_013273 | AAGT | 3 | 788 | 798 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 260677374 |
| 2 | NC_013273 | TTTC | 3 | 2597 | 2607 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 270040591 |
| 3 | NC_013273 | TTTA | 3 | 4484 | 4495 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_013273 | TTCT | 3 | 5113 | 5123 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 260677376 |
| 5 | NC_013273 | TTAA | 3 | 5959 | 5970 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_013273 | ATTT | 3 | 8892 | 8903 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_013273 | TTTA | 3 | 9210 | 9221 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_013273 | GAAA | 3 | 10909 | 10920 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 260677380 |
| 9 | NC_013273 | ATTT | 3 | 11880 | 11890 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 10 | NC_013273 | ATGA | 3 | 11959 | 11970 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_013273 | GGCG | 3 | 14562 | 14572 | 11 | 0 % | 0 % | 75 % | 25 % | 9 % | Non-Coding |
| 12 | NC_013273 | TAGG | 3 | 15306 | 15317 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 13 | NC_013273 | CAAT | 3 | 16658 | 16670 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 14 | NC_013273 | ATAA | 3 | 17225 | 17235 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 15 | NC_013273 | GTAT | 3 | 17438 | 17448 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 16 | NC_013273 | AAAG | 3 | 19097 | 19108 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 17 | NC_013273 | ATCA | 3 | 19691 | 19701 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 18 | NC_013273 | CTTT | 3 | 20021 | 20032 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 19 | NC_013273 | TAAA | 3 | 20334 | 20345 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_013273 | CTTT | 3 | 20686 | 20696 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 21 | NC_013273 | TTTC | 3 | 22430 | 22442 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 260677410 |
| 22 | NC_013273 | AAAT | 3 | 26778 | 26789 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 260677411 |
| 23 | NC_013273 | AGAA | 3 | 27028 | 27039 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 260677411 |
| 24 | NC_013273 | GTTC | 3 | 29074 | 29084 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 260677412 |
| 25 | NC_013273 | TTCA | 3 | 29768 | 29778 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 260677412 |
| 26 | NC_013273 | TTAA | 3 | 32033 | 32044 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_013273 | GAAA | 3 | 32176 | 32186 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 28 | NC_013273 | CTTT | 3 | 35017 | 35027 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 29 | NC_013273 | CTTT | 3 | 35301 | 35311 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_013273 | CATA | 3 | 36193 | 36203 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 260677416 |
| 31 | NC_013273 | AAAG | 3 | 36209 | 36220 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 260677416 |
| 32 | NC_013273 | AAAT | 3 | 39371 | 39382 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 260677419 |
| 33 | NC_013273 | AAGA | 3 | 41850 | 41861 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 260677420 |
| 34 | NC_013273 | CTAG | 3 | 42793 | 42805 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 260677420 |
| 35 | NC_013273 | TCCT | 3 | 45237 | 45248 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 260677421 |
| 36 | NC_013273 | AAAG | 3 | 47284 | 47294 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_013273 | AGAA | 3 | 48932 | 48943 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 38 | NC_013273 | GAAT | 3 | 49133 | 49143 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 39 | NC_013273 | TTGA | 3 | 49249 | 49261 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 40 | NC_013273 | CTTT | 3 | 49785 | 49796 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 41 | NC_013273 | CAGA | 3 | 50936 | 50946 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 260677423 |
| 42 | NC_013273 | CTTT | 3 | 52589 | 52600 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 43 | NC_013273 | AGAA | 3 | 52749 | 52759 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 44 | NC_013273 | TTTA | 3 | 52933 | 52943 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 45 | NC_013273 | TTCT | 3 | 53200 | 53210 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_013273 | TAGG | 4 | 54356 | 54371 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
| 47 | NC_013273 | AATT | 3 | 56496 | 56507 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 48 | NC_013273 | TTAT | 3 | 59626 | 59637 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 260677428 |
| 49 | NC_013273 | AGAT | 3 | 60809 | 60820 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 50 | NC_013273 | ATTC | 3 | 61755 | 61765 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 51 | NC_013273 | AGAA | 3 | 70632 | 70643 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 260677442 |
| 52 | NC_013273 | ACTT | 3 | 72953 | 72963 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 260677442 |
| 53 | NC_013273 | CTTT | 4 | 76524 | 76538 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 260677442 |
| 54 | NC_013273 | CTTT | 3 | 81466 | 81476 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 260677442 |
| 55 | NC_013273 | GATC | 3 | 87884 | 87895 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 260677442 |
| 56 | NC_013273 | TTCT | 3 | 92655 | 92665 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 260677442 |
| 57 | NC_013273 | TCTA | 3 | 94364 | 94375 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 260677475 |
| 58 | NC_013273 | AAAC | 3 | 97540 | 97552 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 260677475 |
| 59 | NC_013273 | ATCC | 3 | 97674 | 97685 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 260677475 |
| 60 | NC_013273 | CTAT | 3 | 98062 | 98073 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 260677475 |
| 61 | NC_013273 | ACGG | 3 | 100931 | 100942 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 260677475 |
| 62 | NC_013273 | AGGT | 3 | 101215 | 101226 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 260677475 |
| 63 | NC_013273 | AACG | 3 | 102540 | 102551 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | 260677475 |
| 64 | NC_013273 | AAAG | 4 | 103873 | 103888 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 260677475 |
| 65 | NC_013273 | GTTA | 3 | 107940 | 107950 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 260677475 |
| 66 | NC_013273 | ATTG | 3 | 108054 | 108065 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 260677475 |
| 67 | NC_013273 | GCAA | 3 | 108709 | 108719 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 260677475 |
| 68 | NC_013273 | ATTT | 3 | 110478 | 110488 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 260677475 |
| 69 | NC_013273 | ATTG | 3 | 112881 | 112893 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 260677475 |
| 70 | NC_013273 | TTTA | 3 | 113328 | 113339 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 260677475 |
| 71 | NC_013273 | ATCC | 3 | 117513 | 117524 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 260677475 |
| 72 | NC_013273 | AAAT | 3 | 118458 | 118468 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 260677475 |
| 73 | NC_013273 | CTTT | 4 | 119650 | 119665 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 260677475 |
| 74 | NC_013273 | TCGT | 3 | 120986 | 120997 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 260677475 |
| 75 | NC_013273 | CTTA | 3 | 121193 | 121203 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 260677475 |
| 76 | NC_013273 | CCGT | 3 | 122596 | 122607 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 260677475 |
| 77 | NC_013273 | AGAA | 3 | 125370 | 125380 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 260677475 |
| 78 | NC_013273 | AGGA | 3 | 125629 | 125640 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 260677475 |
| 79 | NC_013273 | GGAT | 3 | 125853 | 125864 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 260677475 |
| 80 | NC_013273 | AGAA | 3 | 130873 | 130883 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 260677476 |
| 81 | NC_013273 | TGAA | 3 | 137533 | 137544 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |