Tetra-nucleotide Imperfect Repeats of Bambusa oldhamii chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_012927 | AAGT | 3 | 790 | 800 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 253729538 |
| 2 | NC_012927 | AGAA | 3 | 3235 | 3246 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_012927 | TTTA | 3 | 4478 | 4489 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_012927 | TTCT | 3 | 5138 | 5148 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 253729539 |
| 5 | NC_012927 | GTTT | 3 | 6769 | 6780 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 6 | NC_012927 | GAAA | 3 | 10446 | 10457 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 253729543 |
| 7 | NC_012927 | CCTT | 3 | 14260 | 14271 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
| 8 | NC_012927 | AAGA | 3 | 14412 | 14423 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 9 | NC_012927 | TAGG | 3 | 14805 | 14816 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 10 | NC_012927 | AAAG | 3 | 15255 | 15265 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 11 | NC_012927 | ATTT | 3 | 15921 | 15931 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_012927 | CTTT | 3 | 15938 | 15949 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 13 | NC_012927 | ATAC | 3 | 17223 | 17235 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 14 | NC_012927 | ATAC | 4 | 17732 | 17747 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
| 15 | NC_012927 | TTTC | 3 | 18398 | 18408 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 16 | NC_012927 | AAAT | 3 | 18438 | 18449 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_012927 | AAAG | 3 | 18517 | 18528 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_012927 | AAAG | 3 | 18821 | 18832 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 19 | NC_012927 | ATCA | 3 | 19060 | 19070 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_012927 | ATGA | 3 | 19422 | 19433 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_012927 | AGAA | 3 | 26392 | 26403 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 253729548 |
| 22 | NC_012927 | TTCA | 3 | 29132 | 29142 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 253729549 |
| 23 | NC_012927 | TTAA | 3 | 31373 | 31384 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_012927 | CTTT | 3 | 34358 | 34368 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 25 | NC_012927 | AAAG | 3 | 35661 | 35672 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 253729553 |
| 26 | NC_012927 | TTTC | 3 | 38007 | 38017 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_012927 | CAAA | 3 | 38809 | 38820 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 28 | NC_012927 | ATCA | 3 | 44278 | 44288 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 253729558 |
| 29 | NC_012927 | TCCT | 3 | 44686 | 44697 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 253729558 |
| 30 | NC_012927 | TTTC | 3 | 44790 | 44800 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 253729558 |
| 31 | NC_012927 | TTCA | 3 | 45942 | 45953 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 32 | NC_012927 | TTGA | 3 | 48680 | 48692 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 33 | NC_012927 | TATT | 3 | 49960 | 49971 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 34 | NC_012927 | CAGA | 3 | 50454 | 50464 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 253729560 |
| 35 | NC_012927 | TAGG | 4 | 53828 | 53843 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
| 36 | NC_012927 | AATT | 3 | 55972 | 55983 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_012927 | AATA | 4 | 58302 | 58318 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 38 | NC_012927 | TATT | 4 | 58328 | 58344 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | Non-Coding |
| 39 | NC_012927 | ATTC | 3 | 61588 | 61598 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 40 | NC_012927 | GAAA | 3 | 64985 | 64996 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 41 | NC_012927 | TTTC | 3 | 65377 | 65387 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 42 | NC_012927 | TAAA | 3 | 65617 | 65628 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_012927 | AAAG | 3 | 66340 | 66350 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 44 | NC_012927 | AAAT | 3 | 67593 | 67604 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 253729577 |
| 45 | NC_012927 | AGAA | 3 | 70612 | 70623 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 253729537 |
| 46 | NC_012927 | AAAG | 3 | 70749 | 70759 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 253729537 |
| 47 | NC_012927 | TTTA | 3 | 73961 | 73972 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 253729537 |
| 48 | NC_012927 | TCTT | 5 | 75811 | 75829 | 19 | 0 % | 75 % | 0 % | 25 % | 10 % | 253729537 |
| 49 | NC_012927 | TTTG | 4 | 82886 | 82901 | 16 | 0 % | 75 % | 25 % | 0 % | 6 % | 253729537 |
| 50 | NC_012927 | AATG | 3 | 83303 | 83313 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 253729537 |
| 51 | NC_012927 | TTCT | 3 | 91627 | 91637 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 253729537 |
| 52 | NC_012927 | CTTT | 3 | 93723 | 93733 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 53 | NC_012927 | AAAC | 3 | 96511 | 96523 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | Non-Coding |
| 54 | NC_012927 | ATCC | 3 | 96645 | 96656 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 55 | NC_012927 | CTAT | 3 | 97033 | 97044 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 56 | NC_012927 | ACGG | 3 | 99904 | 99915 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
| 57 | NC_012927 | AGGT | 3 | 100188 | 100199 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 58 | NC_012927 | AACG | 3 | 101513 | 101524 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | Non-Coding |
| 59 | NC_012927 | AAAG | 4 | 102849 | 102864 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 60 | NC_012927 | GAAT | 3 | 104457 | 104467 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 61 | NC_012927 | AAGG | 3 | 104469 | 104480 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 62 | NC_012927 | AAAG | 3 | 104793 | 104803 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 253729601 |
| 63 | NC_012927 | TTTG | 3 | 112491 | 112502 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 64 | NC_012927 | ATTC | 3 | 117773 | 117783 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 65 | NC_012927 | CTTT | 4 | 119376 | 119391 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 66 | NC_012927 | TCGT | 3 | 120715 | 120726 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | Non-Coding |
| 67 | NC_012927 | CTTA | 3 | 120922 | 120932 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 68 | NC_012927 | CCGT | 3 | 122325 | 122336 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | Non-Coding |
| 69 | NC_012927 | AGGA | 3 | 125360 | 125371 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 70 | NC_012927 | GGAT | 3 | 125584 | 125595 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 71 | NC_012927 | AAAG | 3 | 128507 | 128517 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 72 | NC_012927 | AGAA | 3 | 130603 | 130613 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 253729611 |
| 73 | NC_012927 | TGAA | 3 | 136119 | 136130 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 74 | NC_012927 | CATT | 3 | 138927 | 138937 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |