All Imperfect Repeats of Pyramimonas parkeae chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_012099 | CAAG | 3 | 293 | 303 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 224178060 |
2 | NC_012099 | TCT | 4 | 393 | 403 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 224178060 |
3 | NC_012099 | TTA | 4 | 1186 | 1197 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
4 | NC_012099 | CCA | 4 | 1613 | 1624 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | Non-Coding |
5 | NC_012099 | ATA | 4 | 1785 | 1795 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
6 | NC_012099 | TTGA | 3 | 2978 | 2988 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
7 | NC_012099 | A | 12 | 3284 | 3295 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | Non-Coding |
8 | NC_012099 | AGA | 5 | 3883 | 3896 | 14 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | 224178107 |
9 | NC_012099 | ATTC | 3 | 4911 | 4922 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 224178107 |
10 | NC_012099 | GAT | 4 | 5134 | 5145 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 224178107 |
11 | NC_012099 | TATT | 3 | 5172 | 5182 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
12 | NC_012099 | TGG | 4 | 5534 | 5545 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | Non-Coding |
13 | NC_012099 | GAACTA | 3 | 5604 | 5622 | 19 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
14 | NC_012099 | ACTAAG | 3 | 5990 | 6006 | 17 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
15 | NC_012099 | ACTAAG | 3 | 6132 | 6148 | 17 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
16 | NC_012099 | TGTT | 3 | 6448 | 6458 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
17 | NC_012099 | TTAT | 8 | 8695 | 8726 | 32 | 25 % | 75 % | 0 % | 0 % | 9 % | 224178041 |
18 | NC_012099 | CTCTT | 3 | 8846 | 8859 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 224178041 |
19 | NC_012099 | TTTC | 3 | 9044 | 9054 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 224178041 |
20 | NC_012099 | AATA | 3 | 9812 | 9822 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 224178051 |
21 | NC_012099 | CCT | 4 | 10386 | 10398 | 13 | 0 % | 33.33 % | 0 % | 66.67 % | 7 % | 224178071 |
22 | NC_012099 | AGGA | 3 | 10493 | 10504 | 12 | 50 % | 0 % | 50 % | 0 % | 0 % | Non-Coding |
23 | NC_012099 | AAT | 4 | 10785 | 10796 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 224178061 |
24 | NC_012099 | TTA | 4 | 12221 | 12232 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
25 | NC_012099 | AATGCA | 3 | 12577 | 12595 | 19 | 50 % | 16.67 % | 16.67 % | 16.67 % | 10 % | 224178037 |
26 | NC_012099 | CAAA | 3 | 12963 | 12973 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
27 | NC_012099 | TTA | 4 | 13825 | 13836 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
28 | NC_012099 | TTC | 4 | 14818 | 14829 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
29 | NC_012099 | TAA | 4 | 15273 | 15283 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 224178102 |
30 | NC_012099 | ACCG | 3 | 15631 | 15641 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | Non-Coding |
31 | NC_012099 | TGT | 4 | 16515 | 16526 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 224178075 |
32 | NC_012099 | CTTTTT | 3 | 16963 | 16981 | 19 | 0 % | 83.33 % | 0 % | 16.67 % | 10 % | Non-Coding |
33 | NC_012099 | TAA | 4 | 20338 | 20349 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
34 | NC_012099 | TAAA | 3 | 20653 | 20663 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 224178106 |
35 | NC_012099 | TTTA | 3 | 20701 | 20712 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 224178091 |
36 | NC_012099 | AGTA | 3 | 20880 | 20890 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 224178091 |
37 | NC_012099 | TTCTTT | 3 | 20922 | 20940 | 19 | 0 % | 83.33 % | 0 % | 16.67 % | 10 % | 224178091 |
38 | NC_012099 | TTAA | 3 | 21319 | 21330 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 224178039 |
39 | NC_012099 | TAA | 4 | 22638 | 22649 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 224178076 |
40 | NC_012099 | CAAT | 3 | 23453 | 23463 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 224178095 |
41 | NC_012099 | CAC | 4 | 24815 | 24826 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | 224178078 |
42 | NC_012099 | CTA | 4 | 24905 | 24915 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 224178078 |
43 | NC_012099 | CATA | 3 | 25518 | 25528 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 224178078 |
44 | NC_012099 | AAAT | 3 | 25532 | 25542 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
45 | NC_012099 | GAA | 4 | 26650 | 26661 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 224178074 |
46 | NC_012099 | T | 14 | 27543 | 27556 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
47 | NC_012099 | TA | 6 | 27589 | 27599 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
48 | NC_012099 | GGT | 4 | 28208 | 28219 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 224178028 |
49 | NC_012099 | TAT | 4 | 31254 | 31266 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 224178028 |
50 | NC_012099 | AGA | 4 | 32229 | 32240 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 224178029 |
51 | NC_012099 | CTTT | 3 | 32371 | 32383 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
52 | NC_012099 | AAAG | 3 | 32394 | 32406 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
53 | NC_012099 | CAG | 5 | 32516 | 32530 | 15 | 33.33 % | 0 % | 33.33 % | 33.33 % | 6 % | 224178062 |
54 | NC_012099 | TAATT | 3 | 34995 | 35009 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
55 | NC_012099 | TGA | 4 | 36008 | 36019 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 224178034 |
56 | NC_012099 | ATTC | 3 | 36153 | 36164 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 224178034 |
57 | NC_012099 | TAA | 4 | 36682 | 36693 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
58 | NC_012099 | TCT | 4 | 39596 | 39606 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 224178055 |
59 | NC_012099 | GTTTTT | 3 | 41557 | 41575 | 19 | 0 % | 83.33 % | 16.67 % | 0 % | 5 % | Non-Coding |
60 | NC_012099 | TGT | 4 | 42400 | 42411 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 224178090 |
61 | NC_012099 | A | 13 | 44360 | 44372 | 13 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
62 | NC_012099 | ATTA | 3 | 44434 | 44445 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 224178105 |
63 | NC_012099 | TAAAA | 3 | 44936 | 44950 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 224178105 |
64 | NC_012099 | TTC | 4 | 45309 | 45320 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 224178050 |
65 | NC_012099 | CAA | 4 | 46594 | 46605 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 224178027 |
66 | NC_012099 | CTT | 4 | 48078 | 48089 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 224178030 |
67 | NC_012099 | ATTT | 3 | 49695 | 49705 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
68 | NC_012099 | TTC | 4 | 50351 | 50362 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 224178035 |
69 | NC_012099 | GTT | 4 | 51511 | 51521 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 224178049 |
70 | NC_012099 | CTT | 5 | 52979 | 52992 | 14 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 224178088 |
71 | NC_012099 | TAGA | 3 | 53231 | 53242 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 224178088 |
72 | NC_012099 | TAAAA | 3 | 53771 | 53786 | 16 | 80 % | 20 % | 0 % | 0 % | 6 % | 224178088 |
73 | NC_012099 | CTTT | 3 | 54781 | 54793 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 224178088 |
74 | NC_012099 | AAAG | 3 | 55460 | 55470 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 224178088 |
75 | NC_012099 | T | 16 | 57981 | 57996 | 16 | 0 % | 100 % | 0 % | 0 % | 6 % | 224178086 |
76 | NC_012099 | TTTC | 3 | 58285 | 58295 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 224178086 |
77 | NC_012099 | ACTA | 3 | 58935 | 58945 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 224178086 |
78 | NC_012099 | TTC | 4 | 59277 | 59288 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 224178086 |
79 | NC_012099 | ATAA | 3 | 59294 | 59304 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 224178086 |
80 | NC_012099 | TTAT | 3 | 59332 | 59344 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 224178086 |
81 | NC_012099 | ATTT | 3 | 59915 | 59925 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 224178086 |
82 | NC_012099 | TTC | 4 | 60078 | 60089 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 0 % | 224178086 |
83 | NC_012099 | TAT | 4 | 60299 | 60310 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 224178086 |
84 | NC_012099 | TA | 6 | 60773 | 60783 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
85 | NC_012099 | TTA | 4 | 60964 | 60976 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
86 | NC_012099 | TTTC | 3 | 62407 | 62417 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 224178038 |
87 | NC_012099 | TAGG | 3 | 63022 | 63032 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 224178038 |
88 | NC_012099 | TAAT | 3 | 64128 | 64139 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
89 | NC_012099 | AAAG | 3 | 64281 | 64291 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
90 | NC_012099 | ATTAGA | 5 | 66373 | 66402 | 30 | 50 % | 33.33 % | 16.67 % | 0 % | 10 % | 224178110 |
91 | NC_012099 | TAGAAG | 4 | 66399 | 66422 | 24 | 50 % | 16.67 % | 33.33 % | 0 % | 8 % | 224178110 |
92 | NC_012099 | AGCG | 3 | 70293 | 70303 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
93 | NC_012099 | TAAAA | 3 | 70440 | 70453 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
94 | NC_012099 | GAGG | 3 | 71571 | 71582 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
95 | NC_012099 | AATA | 3 | 71641 | 71651 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
96 | NC_012099 | AGGT | 3 | 71769 | 71780 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
97 | NC_012099 | TATT | 3 | 73180 | 73190 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
98 | NC_012099 | TA | 7 | 73221 | 73233 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
99 | NC_012099 | GAAGA | 3 | 73354 | 73367 | 14 | 60 % | 0 % | 40 % | 0 % | 7 % | Non-Coding |
100 | NC_012099 | TA | 6 | 74763 | 74774 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 224178113 |
101 | NC_012099 | AAAT | 3 | 79174 | 79185 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 224178101 |
102 | NC_012099 | AAT | 4 | 79387 | 79398 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 224178101 |
103 | NC_012099 | ACAA | 3 | 80075 | 80085 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 224178043 |
104 | NC_012099 | TAAA | 3 | 81125 | 81135 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 224178043 |
105 | NC_012099 | CTTT | 3 | 81552 | 81562 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
106 | NC_012099 | AAAAAG | 3 | 81598 | 81616 | 19 | 83.33 % | 0 % | 16.67 % | 0 % | 10 % | Non-Coding |
107 | NC_012099 | ATG | 4 | 82065 | 82076 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 224178047 |
108 | NC_012099 | GTT | 4 | 83145 | 83156 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 0 % | 224178040 |
109 | NC_012099 | AAAT | 3 | 83291 | 83301 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 224178040 |
110 | NC_012099 | TTAC | 3 | 83898 | 83908 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 224178040 |
111 | NC_012099 | TTTC | 3 | 84624 | 84634 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 224178045 |
112 | NC_012099 | ATG | 4 | 85436 | 85446 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 224178045 |
113 | NC_012099 | TTTA | 3 | 85476 | 85488 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 224178045 |
114 | NC_012099 | TTC | 4 | 86843 | 86854 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 224178046 |
115 | NC_012099 | TGT | 4 | 86865 | 86876 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 224178046 |
116 | NC_012099 | TTCT | 3 | 86995 | 87005 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 224178033 |
117 | NC_012099 | TAT | 4 | 87281 | 87293 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 224178033 |
118 | NC_012099 | CTTTA | 3 | 87542 | 87555 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 224178033 |
119 | NC_012099 | ACTT | 3 | 87633 | 87643 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 224178033 |
120 | NC_012099 | TA | 6 | 88114 | 88125 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
121 | NC_012099 | TAT | 4 | 88132 | 88142 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
122 | NC_012099 | TTCT | 3 | 91431 | 91442 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
123 | NC_012099 | TCTCT | 3 | 93390 | 93403 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
124 | NC_012099 | TA | 7 | 93526 | 93538 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
125 | NC_012099 | AAAT | 3 | 93568 | 93578 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
126 | NC_012099 | T | 12 | 93680 | 93691 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | Non-Coding |
127 | NC_012099 | CTAC | 3 | 94977 | 94988 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
128 | NC_012099 | TCGGT | 3 | 95908 | 95921 | 14 | 0 % | 40 % | 40 % | 20 % | 7 % | Non-Coding |
129 | NC_012099 | CTG | 4 | 99278 | 99289 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 224178036 |
130 | NC_012099 | CTTCTA | 4 | 100337 | 100360 | 24 | 16.67 % | 50 % | 0 % | 33.33 % | 8 % | 224178120 |