Tetra-nucleotide Imperfect Repeats of Ephedra equisetina chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_011954 | TAAG | 3 | 2011 | 2021 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 222139871 |
| 2 | NC_011954 | TTTA | 3 | 7280 | 7291 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 222139874 |
| 3 | NC_011954 | TTAA | 3 | 7782 | 7793 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 222139874 |
| 4 | NC_011954 | AATA | 3 | 18938 | 18949 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 222139883 |
| 5 | NC_011954 | AGAA | 3 | 23518 | 23528 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139884 |
| 6 | NC_011954 | AAAC | 3 | 23963 | 23974 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 222139885 |
| 7 | NC_011954 | GAAA | 3 | 24292 | 24302 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139885 |
| 8 | NC_011954 | GAAA | 3 | 28153 | 28163 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139886 |
| 9 | NC_011954 | TAAA | 3 | 29827 | 29838 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_011954 | TTAT | 3 | 33019 | 33030 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_011954 | GAAA | 3 | 33637 | 33648 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_011954 | TTAA | 3 | 33706 | 33718 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 13 | NC_011954 | CTAT | 7 | 34738 | 34765 | 28 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 14 | NC_011954 | GAAA | 3 | 34960 | 34971 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 15 | NC_011954 | AGGT | 3 | 35208 | 35219 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 16 | NC_011954 | TTTG | 3 | 39233 | 39243 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 222139894 |
| 17 | NC_011954 | TGCA | 3 | 39466 | 39478 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 222139894 |
| 18 | NC_011954 | AATC | 3 | 40547 | 40557 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 222139896 |
| 19 | NC_011954 | TTTA | 3 | 44188 | 44199 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_011954 | TTTC | 3 | 44280 | 44291 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 222139903 |
| 21 | NC_011954 | AAGA | 3 | 45405 | 45416 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 222139906 |
| 22 | NC_011954 | TTTA | 3 | 45975 | 45986 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 222139908 |
| 23 | NC_011954 | TTTA | 3 | 46246 | 46258 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 24 | NC_011954 | TATT | 3 | 49319 | 49330 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 222139909 |
| 25 | NC_011954 | CCCT | 3 | 53616 | 53626 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 222139909 |
| 26 | NC_011954 | TTAA | 3 | 57408 | 57419 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 222139909 |
| 27 | NC_011954 | ATTT | 3 | 57998 | 58009 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 222139909 |
| 28 | NC_011954 | ATGT | 3 | 60180 | 60190 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 222139909 |
| 29 | NC_011954 | TTTG | 3 | 61210 | 61221 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 222139909 |
| 30 | NC_011954 | GATT | 3 | 62820 | 62831 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 222139909 |
| 31 | NC_011954 | TTTC | 3 | 64517 | 64527 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 222139909 |
| 32 | NC_011954 | ATGG | 3 | 64625 | 64635 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 222139909 |
| 33 | NC_011954 | AAAG | 3 | 67366 | 67376 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139909 |
| 34 | NC_011954 | TGGG | 3 | 72275 | 72285 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 222139909 |
| 35 | NC_011954 | GAGG | 3 | 75579 | 75590 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 222139909 |
| 36 | NC_011954 | AGGT | 3 | 75797 | 75808 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 222139909 |
| 37 | NC_011954 | CTAT | 3 | 77221 | 77231 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 222139909 |
| 38 | NC_011954 | AACC | 3 | 77396 | 77408 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 222139909 |
| 39 | NC_011954 | GAAA | 3 | 78110 | 78120 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139909 |
| 40 | NC_011954 | TCAA | 3 | 78125 | 78136 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 222139909 |
| 41 | NC_011954 | CAAA | 3 | 81683 | 81694 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 222139909 |
| 42 | NC_011954 | TAAA | 3 | 82768 | 82778 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 222139909 |
| 43 | NC_011954 | AGGG | 3 | 82872 | 82882 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 222139909 |
| 44 | NC_011954 | TTTC | 3 | 83851 | 83862 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 222139909 |
| 45 | NC_011954 | CTTT | 4 | 84206 | 84220 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 222139909 |
| 46 | NC_011954 | TATT | 3 | 85515 | 85525 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 222139909 |
| 47 | NC_011954 | TCTA | 3 | 86378 | 86389 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 222139909 |
| 48 | NC_011954 | TTTG | 3 | 86792 | 86803 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 222139909 |
| 49 | NC_011954 | TTCT | 3 | 87601 | 87611 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 222139909 |
| 50 | NC_011954 | TTTA | 4 | 88054 | 88070 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | 222139909 |
| 51 | NC_011954 | TAAA | 3 | 88335 | 88345 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 222139909 |
| 52 | NC_011954 | TTCT | 3 | 88415 | 88426 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 222139909 |
| 53 | NC_011954 | ATAG | 4 | 88960 | 88975 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 222139909 |
| 54 | NC_011954 | TTGA | 3 | 92025 | 92036 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 222139909 |
| 55 | NC_011954 | TTTC | 3 | 92041 | 92051 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 222139909 |
| 56 | NC_011954 | GGTT | 3 | 92753 | 92765 | 13 | 0 % | 50 % | 50 % | 0 % | 7 % | 222139909 |
| 57 | NC_011954 | ATAG | 3 | 92930 | 92940 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 222139909 |
| 58 | NC_011954 | CTAC | 3 | 94351 | 94362 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 222139909 |
| 59 | NC_011954 | CCCA | 3 | 97876 | 97886 | 11 | 25 % | 0 % | 0 % | 75 % | 9 % | 222139909 |
| 60 | NC_011954 | ACCA | 3 | 102293 | 102303 | 11 | 50 % | 0 % | 0 % | 50 % | 9 % | Non-Coding |
| 61 | NC_011954 | GAAA | 3 | 105634 | 105644 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139940 |
| 62 | NC_011954 | AATC | 3 | 107330 | 107341 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 222139940 |
| 63 | NC_011954 | CAAA | 3 | 108940 | 108951 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |