All Imperfect Repeats of Ephedra equisetina chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_011954 | AAAAAT | 3 | 1438 | 1454 | 17 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | 222139871 |
2 | NC_011954 | TAAG | 3 | 2011 | 2021 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 222139871 |
3 | NC_011954 | AGAAAA | 3 | 2548 | 2565 | 18 | 83.33 % | 0 % | 16.67 % | 0 % | 5 % | 222139871 |
4 | NC_011954 | TGA | 4 | 4680 | 4691 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 222139872 |
5 | NC_011954 | TCT | 4 | 7166 | 7176 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 222139874 |
6 | NC_011954 | TA | 6 | 7204 | 7214 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 222139874 |
7 | NC_011954 | TTTA | 3 | 7280 | 7291 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 222139874 |
8 | NC_011954 | GGA | 4 | 7307 | 7318 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 222139874 |
9 | NC_011954 | TTAA | 3 | 7782 | 7793 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 222139874 |
10 | NC_011954 | GCA | 4 | 8000 | 8011 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 222139874 |
11 | NC_011954 | AG | 6 | 8159 | 8169 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
12 | NC_011954 | TAA | 4 | 8652 | 8663 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
13 | NC_011954 | ATG | 4 | 10727 | 10737 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 222139877 |
14 | NC_011954 | TG | 6 | 12654 | 12664 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 222139878 |
15 | NC_011954 | A | 16 | 14436 | 14451 | 16 | 100 % | 0 % | 0 % | 0 % | 6 % | 222139879 |
16 | NC_011954 | T | 14 | 14880 | 14893 | 14 | 0 % | 100 % | 0 % | 0 % | 0 % | 222139879 |
17 | NC_011954 | T | 14 | 15984 | 15997 | 14 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
18 | NC_011954 | TAC | 4 | 17364 | 17375 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | Non-Coding |
19 | NC_011954 | A | 18 | 17825 | 17842 | 18 | 100 % | 0 % | 0 % | 0 % | 5 % | Non-Coding |
20 | NC_011954 | A | 17 | 17884 | 17900 | 17 | 100 % | 0 % | 0 % | 0 % | 5 % | 222139883 |
21 | NC_011954 | AATA | 3 | 18938 | 18949 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 222139883 |
22 | NC_011954 | AAC | 4 | 20875 | 20885 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 222139883 |
23 | NC_011954 | AGAA | 3 | 23518 | 23528 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139884 |
24 | NC_011954 | AAAC | 3 | 23963 | 23974 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 222139885 |
25 | NC_011954 | AGA | 4 | 24176 | 24186 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 222139885 |
26 | NC_011954 | GAAA | 3 | 24292 | 24302 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139885 |
27 | NC_011954 | T | 16 | 27622 | 27637 | 16 | 0 % | 100 % | 0 % | 0 % | 6 % | 222139885 |
28 | NC_011954 | GAAA | 3 | 28153 | 28163 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139886 |
29 | NC_011954 | T | 16 | 28488 | 28503 | 16 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
30 | NC_011954 | TAAA | 3 | 29827 | 29838 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
31 | NC_011954 | GAA | 5 | 30803 | 30817 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 222139889 |
32 | NC_011954 | GAA | 4 | 32541 | 32552 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 222139890 |
33 | NC_011954 | CT | 6 | 32687 | 32698 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
34 | NC_011954 | TTAT | 3 | 33019 | 33030 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
35 | NC_011954 | AAT | 4 | 33198 | 33208 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
36 | NC_011954 | TC | 6 | 33531 | 33542 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
37 | NC_011954 | GAAA | 3 | 33637 | 33648 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
38 | NC_011954 | TTAA | 3 | 33706 | 33718 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
39 | NC_011954 | CTAT | 7 | 34738 | 34765 | 28 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
40 | NC_011954 | GAAA | 3 | 34960 | 34971 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
41 | NC_011954 | AGGT | 3 | 35208 | 35219 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
42 | NC_011954 | AT | 6 | 36013 | 36024 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
43 | NC_011954 | G | 16 | 36279 | 36294 | 16 | 0 % | 0 % | 100 % | 0 % | 6 % | Non-Coding |
44 | NC_011954 | TTTG | 3 | 39233 | 39243 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 222139894 |
45 | NC_011954 | TGCA | 3 | 39466 | 39478 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 222139894 |
46 | NC_011954 | AATC | 3 | 40547 | 40557 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 222139896 |
47 | NC_011954 | T | 13 | 43043 | 43055 | 13 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
48 | NC_011954 | AAT | 4 | 43911 | 43923 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
49 | NC_011954 | TTTA | 3 | 44188 | 44199 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
50 | NC_011954 | TTTC | 3 | 44280 | 44291 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 222139903 |
51 | NC_011954 | AAAAT | 3 | 45223 | 45236 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
52 | NC_011954 | AAGA | 3 | 45405 | 45416 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 222139906 |
53 | NC_011954 | T | 16 | 45855 | 45870 | 16 | 0 % | 100 % | 0 % | 0 % | 6 % | 222139908 |
54 | NC_011954 | TTTA | 3 | 45975 | 45986 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 222139908 |
55 | NC_011954 | TGC | 4 | 46098 | 46109 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 222139908 |
56 | NC_011954 | TA | 8 | 46230 | 46245 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
57 | NC_011954 | TTTA | 3 | 46246 | 46258 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
58 | NC_011954 | ATTGT | 3 | 47517 | 47530 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | 222139909 |
59 | NC_011954 | T | 12 | 47854 | 47865 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | 222139909 |
60 | NC_011954 | AT | 10 | 48087 | 48107 | 21 | 50 % | 50 % | 0 % | 0 % | 9 % | 222139909 |
61 | NC_011954 | GAAAT | 3 | 48135 | 48148 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 222139909 |
62 | NC_011954 | TATT | 3 | 49319 | 49330 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 222139909 |
63 | NC_011954 | A | 14 | 50467 | 50480 | 14 | 100 % | 0 % | 0 % | 0 % | 0 % | 222139909 |
64 | NC_011954 | CCCT | 3 | 53616 | 53626 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 222139909 |
65 | NC_011954 | A | 12 | 54874 | 54885 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | 222139909 |
66 | NC_011954 | T | 18 | 55822 | 55839 | 18 | 0 % | 100 % | 0 % | 0 % | 0 % | 222139909 |
67 | NC_011954 | ACCAT | 3 | 57221 | 57235 | 15 | 40 % | 20 % | 0 % | 40 % | 6 % | 222139909 |
68 | NC_011954 | TTAA | 3 | 57408 | 57419 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 222139909 |
69 | NC_011954 | ATT | 4 | 57901 | 57911 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 222139909 |
70 | NC_011954 | ATTT | 3 | 57998 | 58009 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 222139909 |
71 | NC_011954 | T | 13 | 58209 | 58221 | 13 | 0 % | 100 % | 0 % | 0 % | 7 % | 222139909 |
72 | NC_011954 | T | 14 | 58871 | 58884 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | 222139909 |
73 | NC_011954 | A | 16 | 59370 | 59385 | 16 | 100 % | 0 % | 0 % | 0 % | 6 % | 222139909 |
74 | NC_011954 | TAT | 4 | 59694 | 59705 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 222139909 |
75 | NC_011954 | TA | 8 | 59720 | 59735 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 222139909 |
76 | NC_011954 | CCT | 4 | 60076 | 60086 | 11 | 0 % | 33.33 % | 0 % | 66.67 % | 9 % | 222139909 |
77 | NC_011954 | ATGT | 3 | 60180 | 60190 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 222139909 |
78 | NC_011954 | GAA | 4 | 60276 | 60287 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 222139909 |
79 | NC_011954 | TTTG | 3 | 61210 | 61221 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 222139909 |
80 | NC_011954 | TTTTA | 3 | 61265 | 61279 | 15 | 20 % | 80 % | 0 % | 0 % | 0 % | 222139909 |
81 | NC_011954 | GATT | 3 | 62820 | 62831 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 222139909 |
82 | NC_011954 | TTTC | 3 | 64517 | 64527 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 222139909 |
83 | NC_011954 | ATGG | 3 | 64625 | 64635 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 222139909 |
84 | NC_011954 | ATA | 7 | 65203 | 65223 | 21 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 222139909 |
85 | NC_011954 | AGA | 4 | 65227 | 65239 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | 222139909 |
86 | NC_011954 | ATC | 4 | 65779 | 65789 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 222139909 |
87 | NC_011954 | AAAG | 3 | 67366 | 67376 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139909 |
88 | NC_011954 | TTTTG | 3 | 68769 | 68782 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | 222139909 |
89 | NC_011954 | T | 12 | 70213 | 70224 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | 222139909 |
90 | NC_011954 | CT | 6 | 70410 | 70420 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 222139909 |
91 | NC_011954 | TGGG | 3 | 72275 | 72285 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 222139909 |
92 | NC_011954 | GGTAG | 3 | 73368 | 73381 | 14 | 20 % | 20 % | 60 % | 0 % | 7 % | 222139909 |
93 | NC_011954 | CGA | 4 | 74380 | 74391 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 222139909 |
94 | NC_011954 | GAGG | 3 | 75579 | 75590 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 222139909 |
95 | NC_011954 | AGGT | 3 | 75797 | 75808 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 222139909 |
96 | NC_011954 | CTAT | 3 | 77221 | 77231 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 222139909 |
97 | NC_011954 | AACC | 3 | 77396 | 77408 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 222139909 |
98 | NC_011954 | ATTTG | 3 | 77847 | 77860 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | 222139909 |
99 | NC_011954 | GAAA | 3 | 78110 | 78120 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139909 |
100 | NC_011954 | TCAA | 3 | 78125 | 78136 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 222139909 |
101 | NC_011954 | ATGAT | 3 | 78274 | 78288 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 222139909 |
102 | NC_011954 | AGA | 4 | 79476 | 79487 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 222139909 |
103 | NC_011954 | GGAATA | 3 | 79635 | 79653 | 19 | 50 % | 16.67 % | 33.33 % | 0 % | 10 % | 222139909 |
104 | NC_011954 | A | 12 | 81206 | 81217 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | 222139909 |
105 | NC_011954 | CAAA | 3 | 81683 | 81694 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 222139909 |
106 | NC_011954 | TAAA | 3 | 82768 | 82778 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 222139909 |
107 | NC_011954 | AGGG | 3 | 82872 | 82882 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 222139909 |
108 | NC_011954 | AAAAAG | 3 | 82929 | 82946 | 18 | 83.33 % | 0 % | 16.67 % | 0 % | 5 % | 222139909 |
109 | NC_011954 | T | 14 | 83273 | 83286 | 14 | 0 % | 100 % | 0 % | 0 % | 0 % | 222139909 |
110 | NC_011954 | TTTC | 3 | 83851 | 83862 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 222139909 |
111 | NC_011954 | TTTTC | 3 | 84136 | 84150 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 222139909 |
112 | NC_011954 | CTTT | 4 | 84206 | 84220 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 222139909 |
113 | NC_011954 | T | 13 | 84277 | 84289 | 13 | 0 % | 100 % | 0 % | 0 % | 0 % | 222139909 |
114 | NC_011954 | T | 12 | 84379 | 84390 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | 222139909 |
115 | NC_011954 | GAAAT | 3 | 84521 | 84535 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | 222139909 |
116 | NC_011954 | T | 12 | 84783 | 84794 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | 222139909 |
117 | NC_011954 | TATT | 3 | 85515 | 85525 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 222139909 |
118 | NC_011954 | TAA | 4 | 86059 | 86069 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 222139909 |
119 | NC_011954 | TCTA | 3 | 86378 | 86389 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 222139909 |
120 | NC_011954 | TTTG | 3 | 86792 | 86803 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 222139909 |
121 | NC_011954 | TCT | 4 | 87515 | 87526 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 222139909 |
122 | NC_011954 | TTCT | 3 | 87601 | 87611 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 222139909 |
123 | NC_011954 | TTTA | 4 | 88054 | 88070 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | 222139909 |
124 | NC_011954 | TAAA | 3 | 88335 | 88345 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 222139909 |
125 | NC_011954 | TTCT | 3 | 88415 | 88426 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 222139909 |
126 | NC_011954 | ATAG | 4 | 88960 | 88975 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 222139909 |
127 | NC_011954 | TATTCC | 3 | 90508 | 90526 | 19 | 16.67 % | 50 % | 0 % | 33.33 % | 10 % | 222139909 |
128 | NC_011954 | ATCAT | 3 | 91873 | 91887 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | 222139909 |
129 | NC_011954 | TTGA | 3 | 92025 | 92036 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 222139909 |
130 | NC_011954 | TTTC | 3 | 92041 | 92051 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 222139909 |
131 | NC_011954 | GGTT | 3 | 92753 | 92765 | 13 | 0 % | 50 % | 50 % | 0 % | 7 % | 222139909 |
132 | NC_011954 | ATAG | 3 | 92930 | 92940 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 222139909 |
133 | NC_011954 | CTAC | 3 | 94351 | 94362 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 222139909 |
134 | NC_011954 | TCG | 4 | 95770 | 95781 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 222139909 |
135 | NC_011954 | CCCA | 3 | 97876 | 97886 | 11 | 25 % | 0 % | 0 % | 75 % | 9 % | 222139909 |
136 | NC_011954 | A | 14 | 99937 | 99950 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | 222139909 |
137 | NC_011954 | AGA | 4 | 100046 | 100056 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 222139909 |
138 | NC_011954 | GTA | 4 | 100691 | 100702 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 222139909 |
139 | NC_011954 | CAAAA | 3 | 101379 | 101392 | 14 | 80 % | 0 % | 0 % | 20 % | 7 % | 222139939 |
140 | NC_011954 | ACCA | 3 | 102293 | 102303 | 11 | 50 % | 0 % | 0 % | 50 % | 9 % | Non-Coding |
141 | NC_011954 | TTTTTC | 3 | 102787 | 102805 | 19 | 0 % | 83.33 % | 0 % | 16.67 % | 10 % | 222139940 |
142 | NC_011954 | TGA | 4 | 104371 | 104381 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 222139940 |
143 | NC_011954 | TCT | 4 | 104926 | 104936 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 222139940 |
144 | NC_011954 | TAT | 7 | 104938 | 104958 | 21 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 222139940 |
145 | NC_011954 | ATC | 4 | 105305 | 105315 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 222139940 |
146 | NC_011954 | GAAA | 3 | 105634 | 105644 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 222139940 |
147 | NC_011954 | AATC | 3 | 107330 | 107341 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 222139940 |
148 | NC_011954 | GTAAT | 3 | 108409 | 108422 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | 222139940 |
149 | NC_011954 | ATAAA | 3 | 108881 | 108895 | 15 | 80 % | 20 % | 0 % | 0 % | 0 % | Non-Coding |
150 | NC_011954 | CAAA | 3 | 108940 | 108951 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |