Tri-nucleotide Imperfect Repeats of Trifolium subterraneum chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_011828 | ATT | 5 | 1821 | 1834 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
2 | NC_011828 | GTT | 4 | 4211 | 4221 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 219673995 |
3 | NC_011828 | AAT | 4 | 4638 | 4650 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 219673995 |
4 | NC_011828 | ATT | 4 | 5912 | 5922 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219673995 |
5 | NC_011828 | ACA | 4 | 7485 | 7496 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 219673995 |
6 | NC_011828 | ATT | 4 | 10083 | 10094 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 219673995 |
7 | NC_011828 | ATA | 4 | 11636 | 11647 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 219673995 |
8 | NC_011828 | AAT | 4 | 13722 | 13733 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 219673995 |
9 | NC_011828 | TAA | 4 | 13760 | 13770 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
10 | NC_011828 | ATT | 4 | 13770 | 13780 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219673995 |
11 | NC_011828 | TAT | 4 | 14061 | 14071 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219673995 |
12 | NC_011828 | TAA | 4 | 14473 | 14484 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 219673995 |
13 | NC_011828 | ATT | 4 | 15020 | 15031 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | 219673995 |
14 | NC_011828 | ATT | 4 | 22348 | 22359 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 219673995 |
15 | NC_011828 | TAT | 4 | 24968 | 24982 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 219673995 |
16 | NC_011828 | ATA | 6 | 25643 | 25659 | 17 | 66.67 % | 33.33 % | 0 % | 0 % | 5 % | 219673995 |
17 | NC_011828 | CAG | 4 | 29255 | 29266 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 219673995 |
18 | NC_011828 | TAA | 4 | 29327 | 29337 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
19 | NC_011828 | TAG | 4 | 29634 | 29644 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 219673995 |
20 | NC_011828 | TAT | 4 | 32208 | 32219 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 219673995 |
21 | NC_011828 | ATT | 4 | 33488 | 33499 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 219673995 |
22 | NC_011828 | TCT | 4 | 36532 | 36543 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 219673995 |
23 | NC_011828 | ATT | 4 | 37852 | 37863 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | 219673995 |
24 | NC_011828 | ATA | 4 | 39126 | 39136 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
25 | NC_011828 | AAT | 5 | 42516 | 42529 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 219673995 |
26 | NC_011828 | ATA | 5 | 45251 | 45266 | 16 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | 219673995 |
27 | NC_011828 | TAA | 4 | 45577 | 45587 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
28 | NC_011828 | AGA | 4 | 46429 | 46441 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | 219673995 |
29 | NC_011828 | ATT | 4 | 50299 | 50310 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 219673995 |
30 | NC_011828 | ATG | 4 | 52929 | 52939 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 219673995 |
31 | NC_011828 | GCA | 4 | 54827 | 54838 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 219673995 |
32 | NC_011828 | ATG | 4 | 55153 | 55163 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 219673995 |
33 | NC_011828 | AGT | 4 | 55906 | 55916 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 219673995 |
34 | NC_011828 | GTT | 4 | 56983 | 56993 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 219673995 |
35 | NC_011828 | TCA | 4 | 58581 | 58592 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 219673995 |
36 | NC_011828 | ACC | 4 | 59276 | 59286 | 11 | 33.33 % | 0 % | 0 % | 66.67 % | 9 % | 219673995 |
37 | NC_011828 | AAG | 5 | 59537 | 59551 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 219673995 |
38 | NC_011828 | AAT | 4 | 63441 | 63452 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 219673995 |
39 | NC_011828 | TAT | 5 | 63680 | 63693 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 219673995 |
40 | NC_011828 | AAT | 5 | 63694 | 63708 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | 219673995 |
41 | NC_011828 | GAT | 4 | 63727 | 63738 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 219673995 |
42 | NC_011828 | TAT | 4 | 67153 | 67165 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 219673995 |
43 | NC_011828 | AAC | 4 | 68026 | 68037 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 219673995 |
44 | NC_011828 | TAT | 4 | 68784 | 68794 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219673995 |
45 | NC_011828 | ATA | 4 | 68810 | 68821 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 219673995 |
46 | NC_011828 | ATA | 4 | 68843 | 68853 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
47 | NC_011828 | TAT | 4 | 70096 | 70106 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219673995 |
48 | NC_011828 | TAT | 4 | 71385 | 71395 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219673995 |
49 | NC_011828 | TCT | 4 | 73504 | 73515 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 219673995 |
50 | NC_011828 | AAT | 4 | 80955 | 80966 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 219673995 |
51 | NC_011828 | TAT | 4 | 83462 | 83472 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219673995 |
52 | NC_011828 | ATT | 5 | 84210 | 84224 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 219673995 |
53 | NC_011828 | TTC | 4 | 88389 | 88400 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 219673995 |
54 | NC_011828 | ATC | 4 | 88566 | 88577 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 219673995 |
55 | NC_011828 | TCT | 5 | 89015 | 89028 | 14 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 219673995 |
56 | NC_011828 | TAT | 4 | 89992 | 90003 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | 219673995 |
57 | NC_011828 | TAA | 4 | 90084 | 90094 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
58 | NC_011828 | TAA | 4 | 90329 | 90339 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
59 | NC_011828 | TAT | 4 | 90468 | 90479 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | 219673995 |
60 | NC_011828 | TAA | 4 | 90552 | 90562 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
61 | NC_011828 | TAT | 4 | 90691 | 90702 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | 219673995 |
62 | NC_011828 | TAA | 4 | 90783 | 90793 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 219673995 |
63 | NC_011828 | CAA | 4 | 104304 | 104315 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | Non-Coding |
64 | NC_011828 | ATT | 4 | 104913 | 104924 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
65 | NC_011828 | TTA | 4 | 105123 | 105134 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
66 | NC_011828 | GAA | 4 | 105230 | 105240 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 219673997 |
67 | NC_011828 | TGT | 4 | 105666 | 105678 | 13 | 0 % | 66.67 % | 33.33 % | 0 % | 7 % | 219673998 |
68 | NC_011828 | AGA | 5 | 108681 | 108695 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 219673999 |
69 | NC_011828 | ACT | 4 | 109857 | 109867 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
70 | NC_011828 | TCT | 4 | 111249 | 111259 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | Non-Coding |
71 | NC_011828 | TAT | 4 | 115070 | 115081 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
72 | NC_011828 | AAG | 4 | 115906 | 115916 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 219674006 |
73 | NC_011828 | TCT | 4 | 118520 | 118531 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 219674007 |
74 | NC_011828 | ATT | 4 | 119956 | 119967 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
75 | NC_011828 | ATA | 4 | 121142 | 121152 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
76 | NC_011828 | CAT | 4 | 121541 | 121552 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 219674011 |
77 | NC_011828 | TAT | 4 | 121555 | 121565 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219674011 |
78 | NC_011828 | CAA | 4 | 121664 | 121675 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 219674011 |
79 | NC_011828 | TAT | 4 | 124045 | 124055 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 219674013 |
80 | NC_011828 | TCT | 4 | 124442 | 124453 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
81 | NC_011828 | GAT | 4 | 129334 | 129344 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | Non-Coding |
82 | NC_011828 | GAA | 4 | 129445 | 129455 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | Non-Coding |
83 | NC_011828 | TAC | 4 | 129632 | 129643 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | Non-Coding |
84 | NC_011828 | TTG | 4 | 133539 | 133550 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | Non-Coding |
85 | NC_011828 | ATA | 4 | 139335 | 139345 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
86 | NC_011828 | ATT | 4 | 140590 | 140600 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
87 | NC_011828 | TAT | 4 | 140619 | 140630 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
88 | NC_011828 | ATA | 4 | 140646 | 140656 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
89 | NC_011828 | TAT | 7 | 142164 | 142184 | 21 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
90 | NC_011828 | AAT | 4 | 143902 | 143914 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 219674021 |