Penta-nucleotide Imperfect Repeats of Vaucheria litorea chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_011600 | ATATT | 3 | 2053 | 2067 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 215400693 |
2 | NC_011600 | TATTT | 3 | 4518 | 4531 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 215400700 |
3 | NC_011600 | TGTTT | 3 | 15593 | 15606 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | 215400712 |
4 | NC_011600 | TTTTA | 3 | 20950 | 20963 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 215400714 |
5 | NC_011600 | TTAAT | 4 | 40266 | 40284 | 19 | 40 % | 60 % | 0 % | 0 % | 10 % | Non-Coding |
6 | NC_011600 | AGATC | 3 | 44857 | 44870 | 14 | 40 % | 20 % | 20 % | 20 % | 7 % | 215400743 |
7 | NC_011600 | TTAAT | 3 | 49660 | 49673 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
8 | NC_011600 | TTTAA | 3 | 56764 | 56777 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 215400767 |
9 | NC_011600 | GTAAT | 3 | 57755 | 57770 | 16 | 40 % | 40 % | 20 % | 0 % | 6 % | 215400769 |
10 | NC_011600 | TAAAA | 4 | 60069 | 60089 | 21 | 80 % | 20 % | 0 % | 0 % | 9 % | Non-Coding |
11 | NC_011600 | TTTTA | 3 | 88568 | 88582 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
12 | NC_011600 | AATTT | 3 | 95133 | 95146 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
13 | NC_011600 | TATAA | 3 | 98163 | 98176 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 215400816 |
14 | NC_011600 | TAATT | 3 | 99697 | 99712 | 16 | 40 % | 60 % | 0 % | 0 % | 6 % | 215400819 |
15 | NC_011600 | TTATT | 4 | 100439 | 100459 | 21 | 20 % | 80 % | 0 % | 0 % | 9 % | Non-Coding |
16 | NC_011600 | TTATA | 3 | 108605 | 108618 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 215400830 |