Tetra-nucleotide Imperfect Repeats of Vaucheria litorea chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_011600 | AATA | 3 | 30 | 41 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 2 | NC_011600 | AATT | 3 | 1264 | 1275 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 215400696 |
| 3 | NC_011600 | CATA | 3 | 1467 | 1479 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 215400695 |
| 4 | NC_011600 | TAAA | 3 | 1487 | 1498 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 215400695 |
| 5 | NC_011600 | AAAG | 3 | 1788 | 1798 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 6 | NC_011600 | TTTA | 3 | 3272 | 3282 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 215400698 |
| 7 | NC_011600 | TAAA | 3 | 4263 | 4273 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400699 |
| 8 | NC_011600 | TTTA | 3 | 5198 | 5210 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 9 | NC_011600 | GAAA | 3 | 7003 | 7014 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 215400702 |
| 10 | NC_011600 | GAAA | 3 | 7047 | 7057 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 215400702 |
| 11 | NC_011600 | TGTT | 3 | 7556 | 7566 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 215400703 |
| 12 | NC_011600 | TTAA | 3 | 10909 | 10919 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 215400705 |
| 13 | NC_011600 | ATTA | 3 | 11598 | 11609 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 215400706 |
| 14 | NC_011600 | ATTT | 3 | 11633 | 11643 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 215400706 |
| 15 | NC_011600 | TAAA | 3 | 11843 | 11853 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400706 |
| 16 | NC_011600 | AATT | 4 | 14360 | 14375 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 215400711 |
| 17 | NC_011600 | TTAT | 3 | 15151 | 15162 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_011600 | TAAA | 3 | 15199 | 15209 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 19 | NC_011600 | TTTA | 3 | 17659 | 17669 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 215400712 |
| 20 | NC_011600 | AATT | 3 | 18591 | 18601 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 215400712 |
| 21 | NC_011600 | TGAA | 3 | 19308 | 19318 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 215400713 |
| 22 | NC_011600 | TTAA | 3 | 20606 | 20617 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 215400713 |
| 23 | NC_011600 | ATAA | 3 | 24297 | 24308 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 24 | NC_011600 | TTAA | 3 | 24334 | 24345 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_011600 | ATTA | 3 | 24468 | 24480 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 215400715 |
| 26 | NC_011600 | TAAA | 3 | 26058 | 26068 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_011600 | AATA | 3 | 30945 | 30955 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400724 |
| 28 | NC_011600 | TTAA | 3 | 32227 | 32238 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 215400726 |
| 29 | NC_011600 | TATT | 4 | 32485 | 32500 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 30 | NC_011600 | ATTT | 4 | 32651 | 32666 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 215400727 |
| 31 | NC_011600 | AAAT | 3 | 32755 | 32765 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400728 |
| 32 | NC_011600 | TAAA | 3 | 34819 | 34829 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400729 |
| 33 | NC_011600 | TAAA | 3 | 35477 | 35488 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 215400730 |
| 34 | NC_011600 | AAAT | 3 | 38142 | 38153 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 215400733 |
| 35 | NC_011600 | TTAA | 3 | 38197 | 38208 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_011600 | TAAA | 3 | 40385 | 40396 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_011600 | TTTA | 3 | 43989 | 43999 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_011600 | ATTA | 3 | 44563 | 44574 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 215400742 |
| 39 | NC_011600 | AATT | 3 | 47583 | 47593 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 215400748 |
| 40 | NC_011600 | CATT | 3 | 48619 | 48629 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 215400750 |
| 41 | NC_011600 | TATT | 3 | 48760 | 48770 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 42 | NC_011600 | ATTT | 3 | 50604 | 50615 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 215400754 |
| 43 | NC_011600 | AATT | 3 | 51347 | 51357 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 215400755 |
| 44 | NC_011600 | TTTA | 3 | 51973 | 51984 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 45 | NC_011600 | GTTT | 3 | 51985 | 51995 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 46 | NC_011600 | TTTA | 3 | 52634 | 52645 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 215400757 |
| 47 | NC_011600 | TATT | 3 | 55404 | 55415 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 48 | NC_011600 | TTTA | 3 | 57143 | 57153 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 215400768 |
| 49 | NC_011600 | AGTT | 3 | 60297 | 60307 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 215400773 |
| 50 | NC_011600 | ACAA | 3 | 61897 | 61907 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 215400773 |
| 51 | NC_011600 | TAAA | 3 | 64212 | 64222 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 52 | NC_011600 | TGCC | 3 | 64493 | 64504 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | Non-Coding |
| 53 | NC_011600 | TAGC | 3 | 65361 | 65373 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | Non-Coding |
| 54 | NC_011600 | TAAG | 3 | 66690 | 66701 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 55 | NC_011600 | AATT | 4 | 67395 | 67410 | 16 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 56 | NC_011600 | TAAA | 3 | 67570 | 67581 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 57 | NC_011600 | ATAA | 3 | 69352 | 69363 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 215400777 |
| 58 | NC_011600 | ATTT | 3 | 71914 | 71924 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 215400779 |
| 59 | NC_011600 | TTAA | 3 | 72647 | 72658 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 215400780 |
| 60 | NC_011600 | ATTT | 3 | 73529 | 73540 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 61 | NC_011600 | TTAT | 3 | 73813 | 73824 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 62 | NC_011600 | TTTG | 3 | 74417 | 74427 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 215400782 |
| 63 | NC_011600 | TTTA | 3 | 74522 | 74533 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 64 | NC_011600 | TAAA | 3 | 74825 | 74835 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400783 |
| 65 | NC_011600 | ATTT | 4 | 76103 | 76118 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 66 | NC_011600 | TAAA | 3 | 77585 | 77595 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 67 | NC_011600 | TAAT | 3 | 79884 | 79895 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 68 | NC_011600 | TTTA | 3 | 80382 | 80392 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 215400787 |
| 69 | NC_011600 | ATAA | 3 | 82944 | 82955 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 70 | NC_011600 | ATTA | 3 | 84530 | 84541 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 215400791 |
| 71 | NC_011600 | AATT | 3 | 86161 | 86173 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 215400792 |
| 72 | NC_011600 | AACC | 3 | 87225 | 87236 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 215400793 |
| 73 | NC_011600 | AATT | 3 | 87480 | 87491 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 215400793 |
| 74 | NC_011600 | TAAA | 3 | 87899 | 87909 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400793 |
| 75 | NC_011600 | TAAA | 3 | 89278 | 89288 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400796 |
| 76 | NC_011600 | TATT | 3 | 89630 | 89641 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 77 | NC_011600 | TTTA | 3 | 91109 | 91119 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 78 | NC_011600 | TTTA | 3 | 92174 | 92184 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 79 | NC_011600 | TTTA | 3 | 93683 | 93694 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 215400810 |
| 80 | NC_011600 | ATTT | 3 | 93896 | 93907 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 81 | NC_011600 | TAAT | 3 | 95090 | 95101 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 215400812 |
| 82 | NC_011600 | ATAA | 3 | 95844 | 95855 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 215400813 |
| 83 | NC_011600 | AATA | 3 | 98181 | 98192 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 215400816 |
| 84 | NC_011600 | TTAT | 3 | 98372 | 98383 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 85 | NC_011600 | AAAT | 3 | 99759 | 99769 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 215400819 |
| 86 | NC_011600 | TTAT | 4 | 100240 | 100254 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | 215400821 |
| 87 | NC_011600 | AAAT | 3 | 104090 | 104101 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 88 | NC_011600 | CAAA | 3 | 105504 | 105514 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 215400829 |
| 89 | NC_011600 | TATT | 3 | 110330 | 110341 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 90 | NC_011600 | CTTA | 3 | 110643 | 110654 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 91 | NC_011600 | GCTA | 3 | 111971 | 111983 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | Non-Coding |
| 92 | NC_011600 | CAGG | 3 | 112838 | 112849 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
| 93 | NC_011600 | TTTA | 3 | 113122 | 113132 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 94 | NC_011600 | TAAA | 3 | 113464 | 113475 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |