Tetra-nucleotide Imperfect Repeats of Pinus nelsonii chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_011159 | TCTA | 3 | 3305 | 3315 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 2 | NC_011159 | ATGA | 3 | 4218 | 4229 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_011159 | GAAA | 3 | 6466 | 6476 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 4 | NC_011159 | ATTT | 3 | 12446 | 12458 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 324986492 |
| 5 | NC_011159 | ATCC | 3 | 25940 | 25950 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 6 | NC_011159 | TTAA | 3 | 28163 | 28174 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_011159 | AAGG | 3 | 36497 | 36508 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 324986502 |
| 8 | NC_011159 | GAAA | 3 | 40157 | 40167 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 324986502 |
| 9 | NC_011159 | GATA | 3 | 42557 | 42568 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 324986502 |
| 10 | NC_011159 | TTTC | 3 | 47905 | 47916 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 324986502 |
| 11 | NC_011159 | TTTC | 3 | 51298 | 51308 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 324986502 |
| 12 | NC_011159 | ATTC | 3 | 52137 | 52148 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 324986502 |
| 13 | NC_011159 | ATTT | 3 | 54795 | 54806 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 324986502 |
| 14 | NC_011159 | TCGT | 3 | 60577 | 60587 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 324986502 |
| 15 | NC_011159 | AGTT | 3 | 60843 | 60853 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 324986502 |
| 16 | NC_011159 | AATT | 3 | 64180 | 64190 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 324986502 |
| 17 | NC_011159 | GAAA | 3 | 66572 | 66582 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 324986502 |
| 18 | NC_011159 | AAGG | 3 | 70496 | 70507 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 324986502 |
| 19 | NC_011159 | AATT | 3 | 76352 | 76362 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 324986502 |
| 20 | NC_011159 | TTTC | 3 | 80422 | 80433 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 324986502 |
| 21 | NC_011159 | GATC | 3 | 82083 | 82094 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 324986502 |
| 22 | NC_011159 | ATCC | 3 | 85907 | 85918 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 324986502 |
| 23 | NC_011159 | GAGG | 3 | 89151 | 89162 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 324986502 |
| 24 | NC_011159 | AGGT | 3 | 89358 | 89369 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 324986502 |
| 25 | NC_011159 | AACC | 3 | 90986 | 90998 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 324986502 |
| 26 | NC_011159 | TAGA | 3 | 98247 | 98258 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 324986502 |
| 27 | NC_011159 | GAAA | 3 | 98836 | 98846 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 324986502 |
| 28 | NC_011159 | GAAA | 3 | 100582 | 100592 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 324986502 |
| 29 | NC_011159 | TCAT | 3 | 103441 | 103452 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 324986502 |
| 30 | NC_011159 | AAAT | 3 | 104593 | 104603 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 324986502 |
| 31 | NC_011159 | TTCA | 3 | 105209 | 105220 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 324986502 |
| 32 | NC_011159 | AAAG | 3 | 106845 | 106856 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 324986502 |
| 33 | NC_011159 | CGAT | 3 | 110585 | 110597 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 324986554 |