Tetra-nucleotide Imperfect Repeats of Pinus gerardiana chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_011154 | GATG | 3 | 1463 | 1475 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | Non-Coding |
| 2 | NC_011154 | ATGA | 3 | 4215 | 4226 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_011154 | GAAA | 3 | 6474 | 6484 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 4 | NC_011154 | AATT | 3 | 12227 | 12238 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 237688582 |
| 5 | NC_011154 | ATTT | 3 | 12716 | 12728 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 237688582 |
| 6 | NC_011154 | ATTT | 3 | 17256 | 17268 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 237688586 |
| 7 | NC_011154 | ATGA | 3 | 25991 | 26002 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_011154 | ATCC | 3 | 26233 | 26243 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 9 | NC_011154 | TTAA | 3 | 28452 | 28463 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_011154 | AAGG | 3 | 36770 | 36781 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 237688592 |
| 11 | NC_011154 | GAAA | 3 | 40501 | 40511 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 237688592 |
| 12 | NC_011154 | TATT | 4 | 41075 | 41090 | 16 | 25 % | 75 % | 0 % | 0 % | 0 % | 237688592 |
| 13 | NC_011154 | GATA | 3 | 42527 | 42538 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 237688592 |
| 14 | NC_011154 | GAAA | 3 | 49305 | 49315 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 237688592 |
| 15 | NC_011154 | GAAG | 3 | 50387 | 50398 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 237688592 |
| 16 | NC_011154 | TTTC | 3 | 51490 | 51500 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 237688592 |
| 17 | NC_011154 | ATTC | 3 | 52336 | 52347 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 237688592 |
| 18 | NC_011154 | ATTT | 3 | 54979 | 54990 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 237688592 |
| 19 | NC_011154 | TCGT | 3 | 60765 | 60775 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 237688592 |
| 20 | NC_011154 | AGTT | 3 | 61031 | 61041 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 237688592 |
| 21 | NC_011154 | AATT | 3 | 64386 | 64396 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 237688592 |
| 22 | NC_011154 | TATT | 3 | 65133 | 65143 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 237688592 |
| 23 | NC_011154 | GAAA | 3 | 66615 | 66625 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 237688592 |
| 24 | NC_011154 | AATT | 3 | 76417 | 76427 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 237688592 |
| 25 | NC_011154 | CATT | 3 | 78621 | 78632 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 237688592 |
| 26 | NC_011154 | TTTC | 3 | 80474 | 80485 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 237688592 |
| 27 | NC_011154 | GATC | 3 | 82130 | 82141 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 237688592 |
| 28 | NC_011154 | ATCC | 3 | 85778 | 85789 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 237688592 |
| 29 | NC_011154 | GAGG | 3 | 89044 | 89055 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 237688592 |
| 30 | NC_011154 | AGGT | 3 | 89251 | 89262 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 237688592 |
| 31 | NC_011154 | AACC | 3 | 90884 | 90896 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 237688592 |
| 32 | NC_011154 | TAGA | 3 | 98254 | 98265 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 237688592 |
| 33 | NC_011154 | GAAA | 3 | 98843 | 98853 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 237688592 |
| 34 | NC_011154 | GAAA | 3 | 100235 | 100245 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 237688592 |
| 35 | NC_011154 | TTCT | 3 | 100790 | 100800 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 237688592 |
| 36 | NC_011154 | ATTT | 3 | 101947 | 101958 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 237688592 |
| 37 | NC_011154 | TCCA | 3 | 102163 | 102174 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 237688592 |
| 38 | NC_011154 | TCAT | 3 | 103126 | 103137 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 237688592 |
| 39 | NC_011154 | TTCA | 3 | 104885 | 104896 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 237688592 |
| 40 | NC_011154 | CCCT | 3 | 116826 | 116837 | 12 | 0 % | 25 % | 0 % | 75 % | 8 % | Non-Coding |