Tetra-nucleotide Imperfect Repeats of Pinus contorta chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_011153 | GATG | 3 | 1624 | 1636 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | Non-Coding |
| 2 | NC_011153 | CCTT | 3 | 6235 | 6245 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 324986330 |
| 3 | NC_011153 | ATGT | 3 | 6981 | 6991 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 4 | NC_011153 | CTTT | 3 | 7303 | 7313 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 5 | NC_011153 | ATTC | 3 | 8635 | 8646 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_011153 | TTTA | 3 | 10258 | 10268 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 237688512 |
| 7 | NC_011153 | ATTT | 3 | 12953 | 12965 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 237688513 |
| 8 | NC_011153 | CATC | 3 | 21359 | 21370 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 237688518 |
| 9 | NC_011153 | ATGA | 3 | 26240 | 26251 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 10 | NC_011153 | ATCC | 3 | 26486 | 26496 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 11 | NC_011153 | TAGA | 3 | 33314 | 33324 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 237688523 |
| 12 | NC_011153 | ATCT | 3 | 37024 | 37035 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 237688523 |
| 13 | NC_011153 | GAAA | 3 | 40741 | 40751 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 237688523 |
| 14 | NC_011153 | TTTA | 3 | 41652 | 41663 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 237688523 |
| 15 | NC_011153 | GATG | 3 | 48321 | 48336 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | 237688523 |
| 16 | NC_011153 | GAAA | 3 | 49841 | 49851 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 237688523 |
| 17 | NC_011153 | GAAG | 3 | 51054 | 51065 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 237688523 |
| 18 | NC_011153 | TCTA | 3 | 51196 | 51207 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 237688523 |
| 19 | NC_011153 | TGAA | 3 | 51301 | 51312 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 237688523 |
| 20 | NC_011153 | ATTC | 3 | 52949 | 52960 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 237688523 |
| 21 | NC_011153 | TCGT | 3 | 61374 | 61384 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 237688523 |
| 22 | NC_011153 | AATT | 3 | 64968 | 64978 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 237688523 |
| 23 | NC_011153 | TTCT | 4 | 69554 | 69568 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 237688523 |
| 24 | NC_011153 | AATT | 3 | 79318 | 79328 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 237688523 |
| 25 | NC_011153 | TTTC | 3 | 81163 | 81174 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 237688523 |
| 26 | NC_011153 | GATC | 3 | 82830 | 82841 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 237688523 |
| 27 | NC_011153 | ATCC | 3 | 86546 | 86557 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 237688523 |
| 28 | NC_011153 | GAGG | 3 | 89804 | 89815 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 237688523 |
| 29 | NC_011153 | AGGT | 3 | 90012 | 90023 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 237688523 |
| 30 | NC_011153 | AACC | 3 | 91632 | 91644 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 237688523 |
| 31 | NC_011153 | ATGG | 3 | 100628 | 100639 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 237688523 |
| 32 | NC_011153 | ATGG | 3 | 100995 | 101006 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 237688523 |
| 33 | NC_011153 | TTCT | 3 | 101230 | 101240 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 237688523 |
| 34 | NC_011153 | TTCT | 3 | 101602 | 101612 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 237688523 |
| 35 | NC_011153 | TCCA | 3 | 105691 | 105702 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 237688523 |
| 36 | NC_011153 | TAAA | 3 | 107818 | 107828 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 237688523 |
| 37 | NC_011153 | TTCA | 3 | 108426 | 108437 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 237688523 |
| 38 | NC_011153 | TTGA | 3 | 108937 | 108947 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 237688523 |
| 39 | NC_011153 | AAAG | 3 | 111910 | 111920 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 40 | NC_011153 | TGAG | 3 | 115550 | 115562 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 237688574 |
| 41 | NC_011153 | TCAA | 3 | 117444 | 117454 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 237688574 |
| 42 | NC_011153 | TTGA | 3 | 119354 | 119364 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 237688574 |