Penta-nucleotide Imperfect Repeats of Oryza sativa Japonica Group mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_011033 | GCCTA | 3 | 11829 | 11843 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | 19403321 |
| 2 | NC_011033 | TAATT | 3 | 19453 | 19467 | 15 | 40 % | 60 % | 0 % | 0 % | 0 % | 19403321 |
| 3 | NC_011033 | ATGGC | 3 | 24790 | 24805 | 16 | 20 % | 20 % | 40 % | 20 % | 6 % | 19403321 |
| 4 | NC_011033 | ATTCT | 3 | 32321 | 32334 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 19403321 |
| 5 | NC_011033 | TTACA | 3 | 44092 | 44106 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | 19403321 |
| 6 | NC_011033 | CAAGA | 3 | 54835 | 54848 | 14 | 60 % | 0 % | 20 % | 20 % | 7 % | 19403321 |
| 7 | NC_011033 | AAAAG | 3 | 64772 | 64786 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 19403321 |
| 8 | NC_011033 | GTGGT | 3 | 72542 | 72555 | 14 | 0 % | 40 % | 60 % | 0 % | 7 % | 19403321 |
| 9 | NC_011033 | CCTAT | 3 | 82782 | 82795 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 19403321 |
| 10 | NC_011033 | GCCTA | 3 | 106356 | 106370 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | 19403321 |
| 11 | NC_011033 | TAATT | 3 | 113980 | 113994 | 15 | 40 % | 60 % | 0 % | 0 % | 0 % | 19403321 |
| 12 | NC_011033 | ATGGC | 3 | 119317 | 119332 | 16 | 20 % | 20 % | 40 % | 20 % | 6 % | 19403321 |
| 13 | NC_011033 | ATTCT | 3 | 126848 | 126861 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 19403321 |
| 14 | NC_011033 | ATACG | 3 | 144552 | 144565 | 14 | 40 % | 20 % | 20 % | 20 % | 7 % | 19403321 |
| 15 | NC_011033 | GGCTT | 4 | 150462 | 150481 | 20 | 0 % | 40 % | 40 % | 20 % | 5 % | 19403321 |
| 16 | NC_011033 | CCCAT | 3 | 151604 | 151617 | 14 | 20 % | 20 % | 0 % | 60 % | 7 % | 19403321 |
| 17 | NC_011033 | TCAAT | 3 | 152540 | 152553 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | 19403321 |
| 18 | NC_011033 | GGTAA | 3 | 173732 | 173747 | 16 | 40 % | 20 % | 40 % | 0 % | 6 % | 19403321 |
| 19 | NC_011033 | CAATT | 3 | 178825 | 178839 | 15 | 40 % | 40 % | 0 % | 20 % | 0 % | 19403321 |
| 20 | NC_011033 | TTTAG | 3 | 180112 | 180125 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | 19403321 |
| 21 | NC_011033 | CTGAT | 3 | 201028 | 201042 | 15 | 20 % | 40 % | 20 % | 20 % | 6 % | 19403321 |
| 22 | NC_011033 | CTTTT | 3 | 221276 | 221289 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 19403321 |
| 23 | NC_011033 | AAAGA | 3 | 231856 | 231869 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 19403321 |
| 24 | NC_011033 | AAAAG | 3 | 233212 | 233226 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 19403321 |
| 25 | NC_011033 | CATTT | 3 | 247549 | 247563 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | 19403321 |
| 26 | NC_011033 | AAAGG | 3 | 247650 | 247664 | 15 | 60 % | 0 % | 40 % | 0 % | 0 % | 19403321 |
| 27 | NC_011033 | CTTTG | 3 | 252013 | 252027 | 15 | 0 % | 60 % | 20 % | 20 % | 6 % | 19403321 |
| 28 | NC_011033 | CTTTT | 3 | 280402 | 280415 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 19403321 |
| 29 | NC_011033 | AATTT | 3 | 306242 | 306255 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 19403321 |
| 30 | NC_011033 | AAAAG | 3 | 307292 | 307305 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 19403321 |
| 31 | NC_011033 | CGAGT | 3 | 307906 | 307920 | 15 | 20 % | 20 % | 40 % | 20 % | 6 % | 19403321 |
| 32 | NC_011033 | ATCCA | 3 | 312023 | 312037 | 15 | 40 % | 20 % | 0 % | 40 % | 0 % | 19403321 |
| 33 | NC_011033 | TTCCC | 3 | 349347 | 349361 | 15 | 0 % | 40 % | 0 % | 60 % | 6 % | Non-Coding |
| 34 | NC_011033 | TTTTC | 3 | 358780 | 358793 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
| 35 | NC_011033 | TCTTA | 4 | 359800 | 359818 | 19 | 20 % | 60 % | 0 % | 20 % | 5 % | Non-Coding |
| 36 | NC_011033 | CGGGC | 3 | 365571 | 365585 | 15 | 0 % | 0 % | 60 % | 40 % | 0 % | 19403325 |
| 37 | NC_011033 | CTTTC | 3 | 374051 | 374064 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 19403325 |
| 38 | NC_011033 | TACCT | 3 | 375429 | 375442 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 19403325 |
| 39 | NC_011033 | ATTTT | 3 | 383951 | 383965 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 19403325 |
| 40 | NC_011033 | TAGGC | 3 | 399871 | 399885 | 15 | 20 % | 20 % | 40 % | 20 % | 6 % | 19403325 |
| 41 | NC_011033 | CTTTT | 3 | 411321 | 411334 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
| 42 | NC_011033 | TAGAA | 3 | 417642 | 417656 | 15 | 60 % | 20 % | 20 % | 0 % | 0 % | Non-Coding |
| 43 | NC_011033 | CATTC | 3 | 419067 | 419080 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
| 44 | NC_011033 | TTCCC | 3 | 430431 | 430445 | 15 | 0 % | 40 % | 0 % | 60 % | 6 % | Non-Coding |
| 45 | NC_011033 | TTTTC | 3 | 439864 | 439877 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
| 46 | NC_011033 | TCTTA | 4 | 440884 | 440902 | 19 | 20 % | 60 % | 0 % | 20 % | 5 % | Non-Coding |
| 47 | NC_011033 | CGGGC | 3 | 446655 | 446669 | 15 | 0 % | 0 % | 60 % | 40 % | 0 % | Non-Coding |
| 48 | NC_011033 | CTTTC | 3 | 455135 | 455148 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
| 49 | NC_011033 | TACCT | 3 | 456513 | 456526 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
| 50 | NC_011033 | ATTTT | 3 | 465035 | 465049 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
| 51 | NC_011033 | ATACG | 3 | 467650 | 467663 | 14 | 40 % | 20 % | 20 % | 20 % | 7 % | Non-Coding |
| 52 | NC_011033 | GGCTT | 4 | 473560 | 473579 | 20 | 0 % | 40 % | 40 % | 20 % | 5 % | Non-Coding |
| 53 | NC_011033 | CCCAT | 3 | 474702 | 474715 | 14 | 20 % | 20 % | 0 % | 60 % | 7 % | Non-Coding |
| 54 | NC_011033 | TCAAT | 3 | 475638 | 475651 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |