Penta-nucleotide Imperfect Repeats of Cryptomeria japonica chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010548 | TTTAC | 3 | 316 | 329 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 172072869 |
2 | NC_010548 | CGATC | 3 | 4147 | 4160 | 14 | 20 % | 20 % | 20 % | 40 % | 7 % | 172072873 |
3 | NC_010548 | TCTTT | 3 | 14624 | 14638 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 172072886 |
4 | NC_010548 | CTTCA | 3 | 15132 | 15145 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 172072887 |
5 | NC_010548 | AAATT | 3 | 17330 | 17343 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 172072890 |
6 | NC_010548 | ATACT | 3 | 34464 | 34478 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | 172072891 |
7 | NC_010548 | ATATT | 3 | 39083 | 39097 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 172072891 |
8 | NC_010548 | TTCTT | 3 | 48305 | 48319 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 172072891 |
9 | NC_010548 | ATCTG | 3 | 51692 | 51706 | 15 | 20 % | 40 % | 20 % | 20 % | 6 % | 172072891 |
10 | NC_010548 | CTTTT | 3 | 61982 | 61996 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 172072891 |
11 | NC_010548 | AAATA | 3 | 63642 | 63655 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 172072891 |
12 | NC_010548 | ATAGA | 3 | 78446 | 78459 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 172072891 |
13 | NC_010548 | GAAAA | 4 | 80026 | 80046 | 21 | 80 % | 0 % | 20 % | 0 % | 9 % | 172072891 |
14 | NC_010548 | TTTGC | 3 | 88866 | 88880 | 15 | 0 % | 60 % | 20 % | 20 % | 6 % | 172072891 |
15 | NC_010548 | ATATT | 3 | 97571 | 97585 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 172072891 |
16 | NC_010548 | ATTAA | 3 | 108025 | 108038 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 172072891 |
17 | NC_010548 | TAGAA | 3 | 115014 | 115028 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | 172072948 |