Tri-nucleotide Imperfect Repeats of Cryptomeria japonica chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010548 | TAA | 4 | 85 | 96 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 172072869 |
2 | NC_010548 | TAT | 4 | 7887 | 7898 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
3 | NC_010548 | CTT | 4 | 10583 | 10594 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 172072880 |
4 | NC_010548 | TCA | 4 | 11258 | 11269 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 0 % | 172072882 |
5 | NC_010548 | ATA | 4 | 14275 | 14286 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 172072886 |
6 | NC_010548 | AGT | 5 | 14941 | 14954 | 14 | 33.33 % | 33.33 % | 33.33 % | 0 % | 7 % | Non-Coding |
7 | NC_010548 | TCT | 4 | 15670 | 15680 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 172072888 |
8 | NC_010548 | CCT | 4 | 17152 | 17162 | 11 | 0 % | 33.33 % | 0 % | 66.67 % | 9 % | 172072889 |
9 | NC_010548 | CTT | 4 | 20160 | 20170 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 172072891 |
10 | NC_010548 | AAG | 4 | 20398 | 20408 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 172072891 |
11 | NC_010548 | ATC | 4 | 25989 | 26000 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 172072891 |
12 | NC_010548 | GTT | 4 | 35470 | 35480 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 172072891 |
13 | NC_010548 | AGG | 4 | 35920 | 35930 | 11 | 33.33 % | 0 % | 66.67 % | 0 % | 9 % | 172072891 |
14 | NC_010548 | TTA | 4 | 38599 | 38610 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 172072891 |
15 | NC_010548 | ATT | 4 | 39950 | 39960 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 172072891 |
16 | NC_010548 | TAT | 4 | 40273 | 40283 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 172072891 |
17 | NC_010548 | TTA | 6 | 40456 | 40473 | 18 | 33.33 % | 66.67 % | 0 % | 0 % | 5 % | 172072891 |
18 | NC_010548 | GCT | 4 | 41305 | 41316 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 172072891 |
19 | NC_010548 | ATA | 4 | 42035 | 42046 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 172072891 |
20 | NC_010548 | ATC | 4 | 42782 | 42792 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 172072891 |
21 | NC_010548 | ATG | 4 | 43870 | 43881 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 172072891 |
22 | NC_010548 | AAT | 4 | 49130 | 49142 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 172072891 |
23 | NC_010548 | CTG | 4 | 59031 | 59042 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 172072891 |
24 | NC_010548 | ATT | 4 | 62422 | 62433 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 172072891 |
25 | NC_010548 | TAT | 4 | 64288 | 64298 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 172072891 |
26 | NC_010548 | TCA | 4 | 65543 | 65553 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 172072891 |
27 | NC_010548 | AGA | 4 | 68920 | 68931 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 172072891 |
28 | NC_010548 | GCT | 4 | 76866 | 76877 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 172072891 |
29 | NC_010548 | ATT | 4 | 77460 | 77470 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 172072891 |
30 | NC_010548 | ATA | 4 | 82742 | 82754 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 172072891 |
31 | NC_010548 | TAA | 4 | 84859 | 84869 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 172072891 |
32 | NC_010548 | GGA | 4 | 86442 | 86453 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 172072891 |
33 | NC_010548 | ATA | 5 | 86910 | 86923 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 172072891 |
34 | NC_010548 | TAA | 4 | 88319 | 88329 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 172072891 |
35 | NC_010548 | CAG | 4 | 89441 | 89451 | 11 | 33.33 % | 0 % | 33.33 % | 33.33 % | 9 % | 172072891 |
36 | NC_010548 | GAA | 4 | 91247 | 91257 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 172072891 |
37 | NC_010548 | GGA | 4 | 97600 | 97610 | 11 | 33.33 % | 0 % | 66.67 % | 0 % | 9 % | 172072891 |
38 | NC_010548 | AAT | 4 | 98488 | 98498 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 172072891 |
39 | NC_010548 | CAA | 4 | 103810 | 103822 | 13 | 66.67 % | 0 % | 0 % | 33.33 % | 7 % | 172072891 |
40 | NC_010548 | CTT | 4 | 104780 | 104792 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 172072891 |
41 | NC_010548 | TCT | 4 | 105020 | 105031 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 172072891 |
42 | NC_010548 | TAT | 4 | 108279 | 108290 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 172072891 |
43 | NC_010548 | GTA | 4 | 109220 | 109231 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 172072891 |
44 | NC_010548 | GAA | 4 | 110523 | 110533 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | Non-Coding |
45 | NC_010548 | TAT | 4 | 113639 | 113650 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
46 | NC_010548 | GAA | 4 | 114830 | 114841 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 172072948 |
47 | NC_010548 | AGA | 4 | 119764 | 119775 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 172072948 |
48 | NC_010548 | GAA | 4 | 120386 | 120397 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 172072948 |
49 | NC_010548 | ATA | 4 | 121592 | 121604 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
50 | NC_010548 | ATA | 4 | 121764 | 121776 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
51 | NC_010548 | TCA | 4 | 122875 | 122886 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 172072949 |
52 | NC_010548 | AGA | 4 | 124748 | 124759 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 172072949 |
53 | NC_010548 | AAG | 4 | 126735 | 126746 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 172072949 |
54 | NC_010548 | ATA | 4 | 127537 | 127548 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 172072949 |
55 | NC_010548 | AGA | 4 | 128053 | 128063 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 172072949 |
56 | NC_010548 | GAA | 4 | 131218 | 131230 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | Non-Coding |