Penta-nucleotide Imperfect Repeats of Trachelium caeruleum chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010442 | CTCTT | 3 | 5241 | 5254 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 170784724 |
2 | NC_010442 | AACAT | 3 | 5613 | 5626 | 14 | 60 % | 20 % | 0 % | 20 % | 7 % | Non-Coding |
3 | NC_010442 | GGATA | 4 | 6757 | 6775 | 19 | 40 % | 20 % | 40 % | 0 % | 10 % | Non-Coding |
4 | NC_010442 | GAAAA | 3 | 8383 | 8396 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
5 | NC_010442 | ATTCA | 3 | 14010 | 14023 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
6 | NC_010442 | AAGAA | 3 | 36098 | 36112 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 170784755 |
7 | NC_010442 | TTTGA | 3 | 40147 | 40161 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | Non-Coding |
8 | NC_010442 | TTTAT | 3 | 43509 | 43523 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
9 | NC_010442 | TTTTG | 3 | 53276 | 53290 | 15 | 0 % | 80 % | 20 % | 0 % | 6 % | Non-Coding |
10 | NC_010442 | TTTGA | 3 | 59054 | 59068 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | Non-Coding |
11 | NC_010442 | CTAAT | 3 | 74866 | 74879 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
12 | NC_010442 | GAATA | 3 | 85432 | 85446 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
13 | NC_010442 | AAAAC | 3 | 115389 | 115403 | 15 | 80 % | 0 % | 0 % | 20 % | 6 % | 170784801 |
14 | NC_010442 | AGGAA | 3 | 117569 | 117582 | 14 | 60 % | 0 % | 40 % | 0 % | 7 % | 170784801 |
15 | NC_010442 | TAAAA | 3 | 131794 | 131808 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 170784801 |
16 | NC_010442 | TCTTT | 3 | 142382 | 142395 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 170784801 |
17 | NC_010442 | TTTGT | 3 | 147012 | 147026 | 15 | 0 % | 80 % | 20 % | 0 % | 6 % | 170784801 |