Tetra-nucleotide Imperfect Repeats of Trachelium caeruleum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_010442 | AAGT | 3 | 1208 | 1218 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 170784722 |
| 2 | NC_010442 | TAAA | 3 | 4006 | 4016 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_010442 | CATT | 3 | 4172 | 4183 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_010442 | GATG | 3 | 4350 | 4362 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | Non-Coding |
| 5 | NC_010442 | AGAC | 3 | 5410 | 5421 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 6 | NC_010442 | TCTA | 3 | 6175 | 6185 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 7 | NC_010442 | AATA | 3 | 7267 | 7278 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_010442 | TTCT | 3 | 7673 | 7683 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 170784725 |
| 9 | NC_010442 | TTCT | 3 | 8574 | 8585 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 10 | NC_010442 | TGAA | 3 | 12513 | 12525 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 170784728 |
| 11 | NC_010442 | TAAA | 3 | 12552 | 12563 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 170784728 |
| 12 | NC_010442 | AAAG | 3 | 16659 | 16670 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 170784731 |
| 13 | NC_010442 | ATTG | 3 | 18122 | 18132 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 170784733 |
| 14 | NC_010442 | AACT | 3 | 18420 | 18430 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 170784734 |
| 15 | NC_010442 | GAAA | 4 | 18612 | 18627 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 170784734 |
| 16 | NC_010442 | AAAT | 3 | 19958 | 19968 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 17 | NC_010442 | GAAA | 3 | 26108 | 26119 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 170784741 |
| 18 | NC_010442 | AACC | 3 | 27572 | 27583 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 170784745 |
| 19 | NC_010442 | AAAG | 3 | 28611 | 28622 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 20 | NC_010442 | TCGA | 3 | 30089 | 30100 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 21 | NC_010442 | AGAA | 3 | 31138 | 31148 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_010442 | CTTT | 3 | 32961 | 32972 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 23 | NC_010442 | TTTA | 3 | 34968 | 34980 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 24 | NC_010442 | AAAG | 3 | 35357 | 35368 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 25 | NC_010442 | ATAG | 3 | 49981 | 49992 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 26 | NC_010442 | ACCT | 3 | 53135 | 53146 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 27 | NC_010442 | TCGA | 3 | 56154 | 56165 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 28 | NC_010442 | AAAT | 3 | 57595 | 57606 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_010442 | TCTA | 3 | 57691 | 57701 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_010442 | ATTT | 3 | 58476 | 58486 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_010442 | TAAA | 3 | 59369 | 59380 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_010442 | GATC | 3 | 65921 | 65933 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 170784772 |
| 33 | NC_010442 | CTTT | 4 | 66425 | 66440 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 34 | NC_010442 | AAAG | 3 | 66989 | 66999 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 35 | NC_010442 | TATT | 3 | 73703 | 73714 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 36 | NC_010442 | TAGA | 3 | 74276 | 74286 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_010442 | TAGG | 3 | 77270 | 77280 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 170784777 |
| 38 | NC_010442 | ATTC | 3 | 79075 | 79085 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 170784778 |
| 39 | NC_010442 | AAAT | 3 | 80630 | 80641 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 170784778 |
| 40 | NC_010442 | AGTA | 3 | 80861 | 80871 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 170784778 |
| 41 | NC_010442 | AATT | 3 | 80987 | 80998 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 170784778 |
| 42 | NC_010442 | AAAG | 3 | 85944 | 85954 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 170784780 |
| 43 | NC_010442 | ACTT | 3 | 86616 | 86626 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 170784781 |
| 44 | NC_010442 | TGGG | 3 | 100096 | 100107 | 12 | 0 % | 25 % | 75 % | 0 % | 0 % | 170784802 |
| 45 | NC_010442 | ATCC | 3 | 103061 | 103072 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 170784802 |
| 46 | NC_010442 | TCTA | 3 | 103455 | 103466 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 170784802 |
| 47 | NC_010442 | AAGG | 3 | 103576 | 103586 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 170784802 |
| 48 | NC_010442 | GAGG | 3 | 106306 | 106317 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 170784802 |
| 49 | NC_010442 | AGGT | 3 | 106627 | 106638 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 170784802 |
| 50 | NC_010442 | TAAG | 3 | 107746 | 107756 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 170784802 |
| 51 | NC_010442 | AAAG | 3 | 109291 | 109302 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 170784802 |
| 52 | NC_010442 | TCTT | 3 | 111651 | 111662 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 170784802 |
| 53 | NC_010442 | TATT | 3 | 112151 | 112162 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 170784802 |
| 54 | NC_010442 | TAGA | 3 | 112272 | 112282 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 170784802 |
| 55 | NC_010442 | TCTT | 3 | 113127 | 113138 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 170784802 |
| 56 | NC_010442 | TTTA | 3 | 113157 | 113168 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 170784802 |
| 57 | NC_010442 | AGAA | 3 | 114073 | 114083 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 170784801 |
| 58 | NC_010442 | AGAA | 3 | 116512 | 116522 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 170784801 |
| 59 | NC_010442 | GACT | 3 | 118290 | 118301 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 170784801 |
| 60 | NC_010442 | AAAT | 3 | 118659 | 118669 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 170784801 |
| 61 | NC_010442 | AAAG | 3 | 118791 | 118801 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 170784801 |
| 62 | NC_010442 | ATTA | 3 | 118889 | 118901 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 170784801 |
| 63 | NC_010442 | GAAA | 3 | 118949 | 118960 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 170784801 |
| 64 | NC_010442 | AGGT | 3 | 121173 | 121184 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 170784801 |
| 65 | NC_010442 | GGCT | 3 | 121949 | 121959 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 170784801 |
| 66 | NC_010442 | AAAT | 3 | 123827 | 123837 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 170784801 |
| 67 | NC_010442 | ATTC | 3 | 124012 | 124022 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 170784801 |
| 68 | NC_010442 | GATT | 3 | 124162 | 124173 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 170784801 |
| 69 | NC_010442 | ATAA | 3 | 129773 | 129783 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 170784801 |
| 70 | NC_010442 | ACTT | 3 | 130085 | 130095 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 170784801 |
| 71 | NC_010442 | CTTT | 3 | 130320 | 130330 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 170784801 |
| 72 | NC_010442 | ACTT | 5 | 131007 | 131025 | 19 | 25 % | 50 % | 0 % | 25 % | 10 % | 170784801 |
| 73 | NC_010442 | AAAT | 3 | 131878 | 131889 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 170784801 |
| 74 | NC_010442 | TTGA | 3 | 134913 | 134924 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 170784801 |
| 75 | NC_010442 | AATC | 3 | 138245 | 138256 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 170784801 |
| 76 | NC_010442 | GAAT | 3 | 138396 | 138406 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 170784801 |
| 77 | NC_010442 | AGCC | 3 | 140459 | 140469 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | 170784801 |
| 78 | NC_010442 | TTTC | 3 | 142133 | 142144 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 170784801 |
| 79 | NC_010442 | CTTT | 3 | 143125 | 143136 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 170784801 |
| 80 | NC_010442 | TTCT | 3 | 143451 | 143462 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 170784801 |
| 81 | NC_010442 | TAAT | 3 | 143517 | 143529 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 170784801 |
| 82 | NC_010442 | CTTT | 3 | 143617 | 143627 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 170784801 |
| 83 | NC_010442 | ATTT | 3 | 143749 | 143759 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 170784801 |
| 84 | NC_010442 | TAGT | 3 | 144116 | 144127 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 170784801 |
| 85 | NC_010442 | TTCT | 3 | 145896 | 145906 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 170784801 |
| 86 | NC_010442 | TCTT | 3 | 146238 | 146248 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 170784801 |
| 87 | NC_010442 | GTTT | 3 | 146611 | 146621 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 170784801 |
| 88 | NC_010442 | TTTC | 3 | 148334 | 148344 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 170784801 |
| 89 | NC_010442 | TAAA | 3 | 148395 | 148405 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 170784801 |
| 90 | NC_010442 | AATA | 3 | 149248 | 149259 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 91 | NC_010442 | AAAG | 5 | 149279 | 149297 | 19 | 75 % | 0 % | 25 % | 0 % | 10 % | Non-Coding |
| 92 | NC_010442 | TTCT | 3 | 152019 | 152029 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 93 | NC_010442 | CTTT | 3 | 153116 | 153127 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 94 | NC_010442 | GGGA | 3 | 154012 | 154024 | 13 | 25 % | 0 % | 75 % | 0 % | 7 % | Non-Coding |
| 95 | NC_010442 | CTTA | 3 | 154662 | 154672 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 96 | NC_010442 | CCTT | 3 | 158832 | 158842 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 97 | NC_010442 | GGAT | 3 | 159346 | 159357 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 98 | NC_010442 | AGAA | 3 | 159844 | 159856 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |