Penta-nucleotide Imperfect Repeats of Manihot esculenta chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_010433 | TCTCT | 3 | 5359 | 5372 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 169794055 |
2 | NC_010433 | GATAA | 3 | 8203 | 8217 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
3 | NC_010433 | CAAAA | 4 | 13715 | 13734 | 20 | 80 % | 0 % | 0 % | 20 % | 10 % | Non-Coding |
4 | NC_010433 | TAAAA | 3 | 17392 | 17406 | 15 | 80 % | 20 % | 0 % | 0 % | 0 % | Non-Coding |
5 | NC_010433 | TAAAA | 3 | 18610 | 18623 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 169794063 |
6 | NC_010433 | CTTTA | 3 | 31167 | 31181 | 15 | 20 % | 60 % | 0 % | 20 % | 0 % | Non-Coding |
7 | NC_010433 | AGAAA | 3 | 32514 | 32528 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
8 | NC_010433 | ATTAT | 3 | 33026 | 33040 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
9 | NC_010433 | AAATC | 3 | 33313 | 33327 | 15 | 60 % | 20 % | 0 % | 20 % | 0 % | Non-Coding |
10 | NC_010433 | TTTCT | 3 | 44648 | 44661 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
11 | NC_010433 | TTTTA | 4 | 50424 | 50442 | 19 | 20 % | 80 % | 0 % | 0 % | 10 % | Non-Coding |
12 | NC_010433 | TTATT | 3 | 55214 | 55229 | 16 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
13 | NC_010433 | ATTTT | 3 | 57351 | 57365 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
14 | NC_010433 | TTATT | 3 | 69728 | 69742 | 15 | 20 % | 80 % | 0 % | 0 % | 0 % | Non-Coding |
15 | NC_010433 | TCCTT | 3 | 85330 | 85345 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | 169794097 |
16 | NC_010433 | ATATG | 3 | 91390 | 91404 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 169794097 |
17 | NC_010433 | TCCGG | 3 | 100165 | 100179 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 169794097 |
18 | NC_010433 | ATTAA | 3 | 118720 | 118734 | 15 | 60 % | 40 % | 0 % | 0 % | 0 % | 169794131 |
19 | NC_010433 | GAAAA | 3 | 127161 | 127175 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 169794131 |
20 | NC_010433 | TATTT | 3 | 131571 | 131584 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 169794131 |
21 | NC_010433 | ACCGG | 3 | 150529 | 150543 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
22 | NC_010433 | TATAA | 4 | 150799 | 150818 | 20 | 60 % | 40 % | 0 % | 0 % | 10 % | Non-Coding |
23 | NC_010433 | CATAC | 3 | 151897 | 151910 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |
24 | NC_010433 | ATATA | 4 | 161428 | 161448 | 21 | 60 % | 40 % | 0 % | 0 % | 4 % | Non-Coding |