Tetra-nucleotide Imperfect Repeats of Manihot esculenta chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_010433 | AAGT | 3 | 1161 | 1171 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 169794053 |
| 2 | NC_010433 | TTTA | 3 | 4670 | 4680 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_010433 | AAAT | 3 | 5608 | 5619 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 169794055 |
| 4 | NC_010433 | ATTC | 3 | 5748 | 5758 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 169794055 |
| 5 | NC_010433 | TTTA | 3 | 5954 | 5964 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 169794055 |
| 6 | NC_010433 | ATAA | 3 | 8664 | 8675 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 169794057 |
| 7 | NC_010433 | AATT | 3 | 10852 | 10862 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_010433 | TTTA | 3 | 11127 | 11137 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_010433 | TATT | 3 | 13436 | 13446 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 10 | NC_010433 | AATA | 3 | 13933 | 13944 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_010433 | ATTT | 3 | 14977 | 14987 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_010433 | TAAA | 3 | 15080 | 15091 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 13 | NC_010433 | GAAA | 3 | 16187 | 16198 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 14 | NC_010433 | AAAG | 3 | 17190 | 17200 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 15 | NC_010433 | TTCA | 3 | 23562 | 23573 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 169794064 |
| 16 | NC_010433 | CCTA | 3 | 25483 | 25493 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 169794065 |
| 17 | NC_010433 | TTTA | 3 | 26893 | 26903 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 169794065 |
| 18 | NC_010433 | TCAA | 3 | 29060 | 29071 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 19 | NC_010433 | AATT | 3 | 29563 | 29574 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_010433 | TCTT | 3 | 32953 | 32964 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_010433 | ATGA | 3 | 34013 | 34023 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_010433 | CAAT | 3 | 34069 | 34081 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 23 | NC_010433 | CTTT | 3 | 34733 | 34744 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 24 | NC_010433 | TTGC | 3 | 37179 | 37189 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 171259285 |
| 25 | NC_010433 | TCTA | 3 | 38123 | 38134 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_010433 | AAAT | 3 | 38210 | 38220 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_010433 | TAAT | 6 | 39335 | 39359 | 25 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_010433 | ATTG | 3 | 41293 | 41303 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 169794072 |
| 29 | NC_010433 | AATG | 3 | 42939 | 42950 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 169794073 |
| 30 | NC_010433 | GTAA | 3 | 47081 | 47091 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 169794074 |
| 31 | NC_010433 | ATCT | 3 | 48713 | 48723 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 32 | NC_010433 | TAAA | 3 | 49003 | 49013 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 33 | NC_010433 | AAAT | 3 | 49401 | 49412 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_010433 | GTTT | 4 | 53302 | 53317 | 16 | 0 % | 75 % | 25 % | 0 % | 6 % | Non-Coding |
| 35 | NC_010433 | AGAA | 3 | 54391 | 54403 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 36 | NC_010433 | AATC | 3 | 54678 | 54688 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_010433 | AAAT | 3 | 57333 | 57343 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_010433 | TTTC | 3 | 57706 | 57717 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 39 | NC_010433 | TAAA | 4 | 62296 | 62310 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 40 | NC_010433 | AGTT | 4 | 62593 | 62608 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | Non-Coding |
| 41 | NC_010433 | ATTT | 3 | 62949 | 62961 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 42 | NC_010433 | TTTC | 3 | 65638 | 65648 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 43 | NC_010433 | AAAT | 3 | 66986 | 66996 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 44 | NC_010433 | GGAG | 3 | 71482 | 71493 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 45 | NC_010433 | TACA | 3 | 72123 | 72134 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 169794094 |
| 46 | NC_010433 | ATAA | 6 | 72313 | 72335 | 23 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_010433 | TAAA | 3 | 72458 | 72468 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 48 | NC_010433 | TTTC | 3 | 73593 | 73605 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 49 | NC_010433 | TTAG | 3 | 74033 | 74044 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 50 | NC_010433 | TTTC | 3 | 80316 | 80326 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 169794097 |
| 51 | NC_010433 | TTAC | 3 | 81633 | 81644 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 169794097 |
| 52 | NC_010433 | TTGT | 3 | 86955 | 86965 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 169794097 |
| 53 | NC_010433 | ATTT | 3 | 87775 | 87785 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 169794097 |
| 54 | NC_010433 | AAAG | 3 | 87874 | 87885 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 169794097 |
| 55 | NC_010433 | ATTT | 3 | 87942 | 87952 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 169794097 |
| 56 | NC_010433 | CAAT | 3 | 88017 | 88027 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 169794097 |
| 57 | NC_010433 | TTCT | 3 | 93114 | 93124 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 169794097 |
| 58 | NC_010433 | CTTT | 3 | 94319 | 94329 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 169794097 |
| 59 | NC_010433 | TGAT | 3 | 96150 | 96162 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 169794097 |
| 60 | NC_010433 | TGAT | 3 | 96192 | 96204 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 169794097 |
| 61 | NC_010433 | AATA | 3 | 97111 | 97123 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 169794097 |
| 62 | NC_010433 | TTGA | 3 | 98000 | 98012 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 169794097 |
| 63 | NC_010433 | AATA | 3 | 98996 | 99007 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 169794097 |
| 64 | NC_010433 | ATCC | 3 | 108333 | 108344 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 169794131 |
| 65 | NC_010433 | TCTA | 3 | 108691 | 108702 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 169794131 |
| 66 | NC_010433 | AAGG | 3 | 108830 | 108840 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 169794131 |
| 67 | NC_010433 | TCAA | 3 | 109567 | 109577 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 169794131 |
| 68 | NC_010433 | GAGG | 3 | 111591 | 111602 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 169794131 |
| 69 | NC_010433 | AGGT | 3 | 111803 | 111814 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 169794131 |
| 70 | NC_010433 | TAAG | 3 | 112923 | 112933 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 169794131 |
| 71 | NC_010433 | AAAT | 3 | 117788 | 117798 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 169794131 |
| 72 | NC_010433 | TATT | 3 | 118843 | 118854 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 169794131 |
| 73 | NC_010433 | ATTT | 3 | 118934 | 118944 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 169794131 |
| 74 | NC_010433 | AAAT | 3 | 119696 | 119706 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 169794131 |
| 75 | NC_010433 | TTTG | 3 | 119836 | 119847 | 12 | 0 % | 75 % | 25 % | 0 % | 0 % | 169794131 |
| 76 | NC_010433 | CCAT | 3 | 119940 | 119951 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 169794131 |
| 77 | NC_010433 | AAAT | 3 | 121431 | 121441 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 169794131 |
| 78 | NC_010433 | AACT | 3 | 121834 | 121845 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 169794131 |
| 79 | NC_010433 | ATGA | 3 | 123814 | 123825 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 169794131 |
| 80 | NC_010433 | TGAA | 3 | 123943 | 123954 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 169794131 |
| 81 | NC_010433 | TTAA | 3 | 125167 | 125179 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 169794131 |
| 82 | NC_010433 | TCAA | 4 | 125376 | 125390 | 15 | 50 % | 25 % | 0 % | 25 % | 6 % | 169794131 |
| 83 | NC_010433 | AATC | 3 | 127507 | 127518 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 169794131 |
| 84 | NC_010433 | TGGG | 3 | 129435 | 129445 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 169794131 |
| 85 | NC_010433 | TATT | 3 | 130718 | 130728 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 169794131 |
| 86 | NC_010433 | TTTG | 3 | 130731 | 130741 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 169794131 |
| 87 | NC_010433 | ATTT | 3 | 131419 | 131429 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 169794131 |
| 88 | NC_010433 | CATT | 3 | 132017 | 132028 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 169794131 |
| 89 | NC_010433 | GTTT | 3 | 132305 | 132317 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | 169794131 |
| 90 | NC_010433 | TTTC | 3 | 133645 | 133656 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 169794131 |
| 91 | NC_010433 | TATT | 3 | 133775 | 133786 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 169794131 |
| 92 | NC_010433 | CTTA | 3 | 137776 | 137786 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 169794131 |
| 93 | NC_010433 | CCTT | 3 | 141869 | 141879 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 169794131 |
| 94 | NC_010433 | GGAT | 3 | 142365 | 142376 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 169794131 |
| 95 | NC_010433 | TATT | 3 | 145328 | 145340 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 169794131 |
| 96 | NC_010433 | TCAA | 3 | 152697 | 152709 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 97 | NC_010433 | ATCA | 3 | 154547 | 154559 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 98 | NC_010433 | TGAT | 3 | 154642 | 154654 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 99 | NC_010433 | AAAG | 3 | 156380 | 156390 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 100 | NC_010433 | TATT | 3 | 157457 | 157468 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |