Tetra-nucleotide Imperfect Repeats of Carica papaya chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_010323 | TGTA | 3 | 247 | 258 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 2 | NC_010323 | TAAA | 3 | 341 | 352 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 3 | NC_010323 | TAAA | 4 | 364 | 379 | 16 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 4 | NC_010323 | TTAT | 3 | 544 | 555 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 5 | NC_010323 | AAGT | 3 | 1291 | 1301 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 167391785 |
| 6 | NC_010323 | TGAA | 4 | 1827 | 1843 | 17 | 50 % | 25 % | 25 % | 0 % | 5 % | Non-Coding |
| 7 | NC_010323 | AATG | 3 | 2183 | 2194 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_010323 | TTCC | 3 | 4430 | 4442 | 13 | 0 % | 50 % | 0 % | 50 % | 7 % | Non-Coding |
| 9 | NC_010323 | TTAT | 10 | 4829 | 4867 | 39 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 10 | NC_010323 | TTCA | 3 | 5241 | 5252 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 11 | NC_010323 | TTTC | 3 | 6252 | 6263 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 167391787 |
| 12 | NC_010323 | GAAA | 3 | 8206 | 8216 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 13 | NC_010323 | ATAA | 3 | 8515 | 8526 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 167391789 |
| 14 | NC_010323 | TTAT | 4 | 9276 | 9290 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 15 | NC_010323 | GTTA | 3 | 9493 | 9504 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_010323 | AAAG | 3 | 10610 | 10622 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 17 | NC_010323 | TATT | 4 | 11003 | 11018 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 18 | NC_010323 | GTTT | 3 | 11141 | 11152 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 167391790 |
| 19 | NC_010323 | ATTT | 3 | 13595 | 13605 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 167391791 |
| 20 | NC_010323 | AAAT | 3 | 14764 | 14775 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_010323 | TTTA | 3 | 15036 | 15047 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_010323 | ATGT | 3 | 17897 | 17907 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 167391795 |
| 23 | NC_010323 | TTCA | 3 | 24007 | 24018 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 167391796 |
| 24 | NC_010323 | CTTT | 3 | 24438 | 24448 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 167391796 |
| 25 | NC_010323 | TCTT | 4 | 28860 | 28875 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 26 | NC_010323 | GAAA | 3 | 31879 | 31889 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 27 | NC_010323 | GAAA | 3 | 36414 | 36425 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 171259360 |
| 28 | NC_010323 | TTGC | 3 | 36815 | 36825 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 171259360 |
| 29 | NC_010323 | AAAC | 3 | 38384 | 38394 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_010323 | AAAT | 3 | 38444 | 38454 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_010323 | AATG | 3 | 42617 | 42628 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 167391805 |
| 32 | NC_010323 | CCAT | 3 | 44340 | 44351 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 33 | NC_010323 | CTTT | 3 | 46740 | 46750 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 167391806 |
| 34 | NC_010323 | TAAA | 3 | 49645 | 49655 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 35 | NC_010323 | ATTA | 9 | 49803 | 49837 | 35 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_010323 | AATT | 3 | 51356 | 51367 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_010323 | CATA | 3 | 51378 | 51388 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 38 | NC_010323 | CAAA | 3 | 52445 | 52456 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 167391808 |
| 39 | NC_010323 | GTCT | 3 | 53042 | 53053 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 167391809 |
| 40 | NC_010323 | CTTT | 3 | 53290 | 53300 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_010323 | GATT | 3 | 53853 | 53864 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_010323 | TCTA | 3 | 54138 | 54148 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 43 | NC_010323 | TTTA | 3 | 54808 | 54818 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 44 | NC_010323 | TTTA | 4 | 54825 | 54840 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 45 | NC_010323 | TAAA | 4 | 54837 | 54852 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 46 | NC_010323 | ATTA | 4 | 54888 | 54903 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 47 | NC_010323 | TTTA | 3 | 60175 | 60185 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 48 | NC_010323 | GGGT | 3 | 67161 | 67171 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | Non-Coding |
| 49 | NC_010323 | AAAG | 3 | 71210 | 71220 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 50 | NC_010323 | TTTA | 4 | 71686 | 71700 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 51 | NC_010323 | TACA | 3 | 72015 | 72026 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 167391826 |
| 52 | NC_010323 | AAAT | 5 | 72136 | 72156 | 21 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 53 | NC_010323 | ATAA | 4 | 72227 | 72242 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 54 | NC_010323 | AAGA | 3 | 72745 | 72756 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 55 | NC_010323 | TGAA | 3 | 73278 | 73289 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 56 | NC_010323 | TCTT | 3 | 73431 | 73441 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 57 | NC_010323 | CTAA | 3 | 73506 | 73516 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 58 | NC_010323 | TCAA | 3 | 73618 | 73629 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 59 | NC_010323 | TATT | 3 | 74361 | 74371 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 167391829 |
| 60 | NC_010323 | TTTA | 3 | 74863 | 74874 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 167391829 |
| 61 | NC_010323 | TGAA | 3 | 76646 | 76656 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 167391829 |
| 62 | NC_010323 | AGGG | 3 | 76833 | 76843 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 167391829 |
| 63 | NC_010323 | CAAA | 3 | 78572 | 78583 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 167391829 |
| 64 | NC_010323 | TTTC | 3 | 79356 | 79367 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 167391829 |
| 65 | NC_010323 | TTAT | 3 | 79589 | 79600 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 167391829 |
| 66 | NC_010323 | TTTA | 3 | 81305 | 81316 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 167391829 |
| 67 | NC_010323 | TTTA | 3 | 84108 | 84119 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 167391829 |
| 68 | NC_010323 | AATT | 3 | 87912 | 87922 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 167391829 |
| 69 | NC_010323 | ACTA | 3 | 88334 | 88344 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 167391829 |
| 70 | NC_010323 | TTTC | 3 | 88556 | 88566 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 167391829 |
| 71 | NC_010323 | TTCT | 3 | 92557 | 92567 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 167391829 |
| 72 | NC_010323 | AAAT | 3 | 92683 | 92694 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 167391829 |
| 73 | NC_010323 | CTTT | 3 | 93750 | 93760 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 167391829 |
| 74 | NC_010323 | TGAT | 3 | 95626 | 95638 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 167391829 |
| 75 | NC_010323 | AATA | 3 | 96509 | 96521 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 167391829 |
| 76 | NC_010323 | TTAT | 5 | 103853 | 103872 | 20 | 25 % | 75 % | 0 % | 0 % | 5 % | 167391830 |
| 77 | NC_010323 | CTAT | 3 | 108025 | 108036 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 167391830 |
| 78 | NC_010323 | GAGG | 3 | 110877 | 110888 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 167391830 |
| 79 | NC_010323 | AGGT | 3 | 111089 | 111100 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 167391830 |
| 80 | NC_010323 | TAAG | 3 | 112209 | 112219 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 167391830 |
| 81 | NC_010323 | TAAA | 4 | 115164 | 115179 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 167391830 |
| 82 | NC_010323 | AAGA | 3 | 117943 | 117954 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 167391830 |
| 83 | NC_010323 | TTTA | 3 | 118472 | 118482 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 167391830 |
| 84 | NC_010323 | AAAT | 3 | 118548 | 118558 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 167391830 |
| 85 | NC_010323 | TTTA | 3 | 120397 | 120408 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 167391830 |
| 86 | NC_010323 | ATGA | 3 | 122797 | 122808 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 167391830 |
| 87 | NC_010323 | GTTG | 3 | 122991 | 123002 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 167391830 |
| 88 | NC_010323 | TCTT | 3 | 124997 | 125008 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 167391830 |
| 89 | NC_010323 | CCAA | 3 | 125299 | 125310 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 167391830 |
| 90 | NC_010323 | AATC | 3 | 126394 | 126405 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 167391830 |
| 91 | NC_010323 | ATGA | 3 | 126555 | 126565 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 167391830 |
| 92 | NC_010323 | AAGA | 3 | 131013 | 131024 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 167391830 |
| 93 | NC_010323 | TGTT | 3 | 131791 | 131802 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 167391830 |
| 94 | NC_010323 | TTCT | 3 | 132405 | 132415 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 167391830 |
| 95 | NC_010323 | GAAA | 3 | 133022 | 133033 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 167391830 |
| 96 | NC_010323 | CTTA | 3 | 136631 | 136641 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 167391830 |
| 97 | NC_010323 | GGAT | 3 | 141211 | 141222 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 167391830 |
| 98 | NC_010323 | ATAA | 5 | 144978 | 144997 | 20 | 75 % | 25 % | 0 % | 0 % | 5 % | 167391830 |
| 99 | NC_010323 | ATCA | 3 | 153254 | 153266 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 167391866 |
| 100 | NC_010323 | TGAT | 3 | 153349 | 153361 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 167391866 |
| 101 | NC_010323 | AAAG | 3 | 155090 | 155100 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 167391866 |
| 102 | NC_010323 | TATT | 3 | 156155 | 156166 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 167391866 |