Tetra-nucleotide Imperfect Repeats of Cuscuta exaltata chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009963 | CTTT | 3 | 2419 | 2431 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 159161235 |
| 2 | NC_009963 | AGTT | 3 | 3974 | 3985 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 3 | NC_009963 | TAAT | 3 | 5157 | 5168 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_009963 | TATT | 3 | 6024 | 6035 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 5 | NC_009963 | ATTT | 3 | 6650 | 6660 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_009963 | ATGA | 3 | 9452 | 9464 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 159161239 |
| 7 | NC_009963 | AAAT | 3 | 11283 | 11294 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_009963 | TTTA | 3 | 12326 | 12336 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_009963 | TTAA | 3 | 13381 | 13393 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 10 | NC_009963 | CATT | 3 | 13462 | 13472 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 11 | NC_009963 | AAAT | 3 | 19541 | 19551 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159161244 |
| 12 | NC_009963 | GAAT | 3 | 19796 | 19806 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161244 |
| 13 | NC_009963 | AACT | 3 | 24624 | 24635 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_009963 | TTTA | 3 | 26344 | 26355 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 15 | NC_009963 | TTTA | 3 | 26740 | 26751 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_009963 | AAAG | 3 | 28424 | 28435 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 17 | NC_009963 | GAAA | 3 | 30475 | 30486 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159161249 |
| 18 | NC_009963 | TAAA | 3 | 32421 | 32431 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 19 | NC_009963 | TGAT | 3 | 35934 | 35946 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 159161253 |
| 20 | NC_009963 | AATG | 3 | 36206 | 36217 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 159161253 |
| 21 | NC_009963 | TAAA | 4 | 40380 | 40395 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 159161254 |
| 22 | NC_009963 | ATGG | 3 | 41029 | 41040 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 23 | NC_009963 | TTTA | 3 | 42676 | 42687 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_009963 | TTGG | 3 | 43739 | 43749 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | Non-Coding |
| 25 | NC_009963 | TTTC | 3 | 48929 | 48939 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 26 | NC_009963 | TAAA | 4 | 50257 | 50271 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 159161263 |
| 27 | NC_009963 | TTTA | 3 | 50707 | 50717 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 28 | NC_009963 | TAAA | 4 | 57113 | 57128 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 29 | NC_009963 | TATT | 3 | 58797 | 58807 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_009963 | TCTT | 3 | 60456 | 60467 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 31 | NC_009963 | AAAC | 3 | 60546 | 60557 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 32 | NC_009963 | TTCC | 3 | 62198 | 62208 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 33 | NC_009963 | TATT | 3 | 62497 | 62508 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161274 |
| 34 | NC_009963 | TTTA | 3 | 63112 | 63123 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161274 |
| 35 | NC_009963 | TTTA | 3 | 67579 | 67589 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159161274 |
| 36 | NC_009963 | TTAT | 3 | 74950 | 74961 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161274 |
| 37 | NC_009963 | TCAA | 3 | 74980 | 74991 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 159161274 |
| 38 | NC_009963 | TTAT | 3 | 75164 | 75175 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161274 |
| 39 | NC_009963 | ATTT | 3 | 77928 | 77938 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159161274 |
| 40 | NC_009963 | AAAT | 5 | 80036 | 80054 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | 159161274 |
| 41 | NC_009963 | TTTC | 3 | 82406 | 82417 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 159161274 |
| 42 | NC_009963 | CGAT | 3 | 85848 | 85860 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 159161274 |
| 43 | NC_009963 | ATAG | 3 | 86707 | 86717 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161274 |
| 44 | NC_009963 | ATCC | 3 | 93387 | 93398 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 159161299 |
| 45 | NC_009963 | AAGG | 3 | 93918 | 93928 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 159161299 |
| 46 | NC_009963 | GAGG | 3 | 96605 | 96616 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 159161299 |
| 47 | NC_009963 | AGGT | 3 | 96811 | 96822 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159161299 |
| 48 | NC_009963 | TAAG | 3 | 97936 | 97946 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161299 |
| 49 | NC_009963 | TGGG | 3 | 98724 | 98736 | 13 | 0 % | 25 % | 75 % | 0 % | 7 % | 159161299 |
| 50 | NC_009963 | TAAC | 3 | 99443 | 99453 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 159161299 |
| 51 | NC_009963 | ATAA | 3 | 101244 | 101254 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159161299 |
| 52 | NC_009963 | AAAT | 3 | 101956 | 101967 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 159161299 |
| 53 | NC_009963 | TAAA | 3 | 102064 | 102074 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159161299 |
| 54 | NC_009963 | TATT | 3 | 103977 | 103987 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159161299 |
| 55 | NC_009963 | TGTT | 3 | 104383 | 104394 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 159161299 |
| 56 | NC_009963 | AATC | 3 | 105085 | 105096 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 159161299 |
| 57 | NC_009963 | TTCT | 3 | 105562 | 105573 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 159161299 |
| 58 | NC_009963 | TAAA | 3 | 107456 | 107466 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159161299 |
| 59 | NC_009963 | TTTG | 3 | 107482 | 107492 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 159161299 |
| 60 | NC_009963 | CTTA | 3 | 110149 | 110159 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159161299 |
| 61 | NC_009963 | CCTT | 3 | 114167 | 114177 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 159161299 |
| 62 | NC_009963 | GGAT | 3 | 114697 | 114708 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159161299 |
| 63 | NC_009963 | AGAT | 3 | 123965 | 123976 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |