All Imperfect Repeats of Cuscuta exaltata chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009963 | TC | 6 | 1375 | 1385 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
2 | NC_009963 | TAAAG | 4 | 1407 | 1426 | 20 | 60 % | 20 % | 20 % | 0 % | 5 % | Non-Coding |
3 | NC_009963 | CTTT | 3 | 2419 | 2431 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 159161235 |
4 | NC_009963 | TA | 7 | 3130 | 3145 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
5 | NC_009963 | ATT | 5 | 3329 | 3343 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
6 | NC_009963 | AGTT | 3 | 3974 | 3985 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
7 | NC_009963 | AT | 7 | 4723 | 4736 | 14 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
8 | NC_009963 | TAAT | 3 | 5157 | 5168 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
9 | NC_009963 | ATA | 4 | 5819 | 5830 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 159161237 |
10 | NC_009963 | TATT | 3 | 6024 | 6035 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
11 | NC_009963 | TAA | 4 | 6064 | 6074 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
12 | NC_009963 | ATTT | 3 | 6650 | 6660 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
13 | NC_009963 | AAC | 4 | 8630 | 8641 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 159161238 |
14 | NC_009963 | ATGA | 3 | 9452 | 9464 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 159161239 |
15 | NC_009963 | T | 12 | 9562 | 9573 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | 159161239 |
16 | NC_009963 | TAT | 5 | 10232 | 10246 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
17 | NC_009963 | A | 12 | 10282 | 10293 | 12 | 100 % | 0 % | 0 % | 0 % | 0 % | Non-Coding |
18 | NC_009963 | AAAT | 3 | 11283 | 11294 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
19 | NC_009963 | TTTA | 3 | 12326 | 12336 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
20 | NC_009963 | A | 13 | 12365 | 12377 | 13 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
21 | NC_009963 | TTAA | 3 | 13381 | 13393 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
22 | NC_009963 | CATT | 3 | 13462 | 13472 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
23 | NC_009963 | TTG | 4 | 13483 | 13494 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | Non-Coding |
24 | NC_009963 | ATG | 4 | 13581 | 13592 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 159161243 |
25 | NC_009963 | T | 13 | 15549 | 15561 | 13 | 0 % | 100 % | 0 % | 0 % | 7 % | 159161243 |
26 | NC_009963 | TA | 6 | 16942 | 16953 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 159161243 |
27 | NC_009963 | TTC | 4 | 19209 | 19219 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 159161244 |
28 | NC_009963 | AAAT | 3 | 19541 | 19551 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159161244 |
29 | NC_009963 | T | 17 | 19565 | 19581 | 17 | 0 % | 100 % | 0 % | 0 % | 5 % | 159161244 |
30 | NC_009963 | AAAATA | 3 | 19594 | 19611 | 18 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | 159161244 |
31 | NC_009963 | GAAT | 3 | 19796 | 19806 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161244 |
32 | NC_009963 | TTC | 4 | 20477 | 20488 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 159161244 |
33 | NC_009963 | T | 12 | 23324 | 23335 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | 159161245 |
34 | NC_009963 | T | 12 | 23969 | 23980 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | 159161245 |
35 | NC_009963 | AT | 8 | 24412 | 24426 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
36 | NC_009963 | AACT | 3 | 24624 | 24635 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
37 | NC_009963 | TTTTG | 3 | 24868 | 24882 | 15 | 0 % | 80 % | 20 % | 0 % | 6 % | Non-Coding |
38 | NC_009963 | AATAA | 3 | 25096 | 25110 | 15 | 80 % | 20 % | 0 % | 0 % | 0 % | Non-Coding |
39 | NC_009963 | TTTA | 3 | 26344 | 26355 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
40 | NC_009963 | TTTA | 3 | 26740 | 26751 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
41 | NC_009963 | AAAAT | 3 | 27715 | 27729 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
42 | NC_009963 | AAATAT | 3 | 27749 | 27766 | 18 | 66.67 % | 33.33 % | 0 % | 0 % | 5 % | Non-Coding |
43 | NC_009963 | AAAG | 3 | 28424 | 28435 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
44 | NC_009963 | TAT | 4 | 28549 | 28560 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
45 | NC_009963 | TAA | 7 | 28797 | 28817 | 21 | 66.67 % | 33.33 % | 0 % | 0 % | 4 % | Non-Coding |
46 | NC_009963 | GAAA | 3 | 30475 | 30486 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159161249 |
47 | NC_009963 | TTG | 4 | 30880 | 30890 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 159161249 |
48 | NC_009963 | TGAGA | 3 | 31442 | 31456 | 15 | 40 % | 20 % | 40 % | 0 % | 0 % | 159161249 |
49 | NC_009963 | AG | 6 | 31724 | 31735 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
50 | NC_009963 | TC | 6 | 32248 | 32258 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 159161250 |
51 | NC_009963 | TAAA | 3 | 32421 | 32431 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
52 | NC_009963 | TGAT | 3 | 35934 | 35946 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 159161253 |
53 | NC_009963 | AATG | 3 | 36206 | 36217 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 159161253 |
54 | NC_009963 | GCA | 4 | 36605 | 36616 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 159161253 |
55 | NC_009963 | TG | 6 | 36642 | 36652 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 159161253 |
56 | NC_009963 | TAAA | 4 | 40380 | 40395 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 159161254 |
57 | NC_009963 | TTA | 4 | 40563 | 40574 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
58 | NC_009963 | ATGG | 3 | 41029 | 41040 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
59 | NC_009963 | A | 15 | 42418 | 42432 | 15 | 100 % | 0 % | 0 % | 0 % | 6 % | Non-Coding |
60 | NC_009963 | TTTA | 3 | 42676 | 42687 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
61 | NC_009963 | TTGG | 3 | 43739 | 43749 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | Non-Coding |
62 | NC_009963 | A | 14 | 44672 | 44685 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
63 | NC_009963 | AGA | 4 | 44990 | 45002 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | Non-Coding |
64 | NC_009963 | TAA | 4 | 47566 | 47576 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 159161260 |
65 | NC_009963 | TA | 6 | 47821 | 47831 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 159161260 |
66 | NC_009963 | AAAATA | 3 | 48007 | 48025 | 19 | 83.33 % | 16.67 % | 0 % | 0 % | 10 % | Non-Coding |
67 | NC_009963 | ATA | 4 | 48085 | 48095 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
68 | NC_009963 | TTTC | 3 | 48929 | 48939 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
69 | NC_009963 | ATTTT | 3 | 49986 | 49999 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
70 | NC_009963 | TAAA | 4 | 50257 | 50271 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 159161263 |
71 | NC_009963 | TTTA | 3 | 50707 | 50717 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
72 | NC_009963 | AAT | 4 | 50993 | 51003 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 159161264 |
73 | NC_009963 | C | 16 | 52164 | 52179 | 16 | 0 % | 0 % | 0 % | 100 % | 0 % | 159161264 |
74 | NC_009963 | TA | 8 | 52467 | 52483 | 17 | 50 % | 50 % | 0 % | 0 % | 5 % | Non-Coding |
75 | NC_009963 | CCG | 4 | 54240 | 54250 | 11 | 0 % | 0 % | 33.33 % | 66.67 % | 9 % | 159161265 |
76 | NC_009963 | T | 13 | 54652 | 54664 | 13 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
77 | NC_009963 | A | 12 | 55181 | 55192 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | Non-Coding |
78 | NC_009963 | TAT | 5 | 55195 | 55209 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 159161266 |
79 | NC_009963 | TAAA | 4 | 57113 | 57128 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
80 | NC_009963 | T | 14 | 57647 | 57660 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
81 | NC_009963 | GTT | 4 | 58367 | 58378 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | Non-Coding |
82 | NC_009963 | A | 12 | 58407 | 58418 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | Non-Coding |
83 | NC_009963 | TATT | 3 | 58797 | 58807 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
84 | NC_009963 | TAA | 4 | 59544 | 59556 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
85 | NC_009963 | TATTTT | 3 | 60099 | 60116 | 18 | 16.67 % | 83.33 % | 0 % | 0 % | 5 % | Non-Coding |
86 | NC_009963 | TCTT | 3 | 60456 | 60467 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
87 | NC_009963 | AAAC | 3 | 60546 | 60557 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
88 | NC_009963 | A | 16 | 61714 | 61729 | 16 | 100 % | 0 % | 0 % | 0 % | 6 % | Non-Coding |
89 | NC_009963 | TTCC | 3 | 62198 | 62208 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
90 | NC_009963 | TATT | 3 | 62497 | 62508 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161274 |
91 | NC_009963 | TTTA | 3 | 63112 | 63123 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161274 |
92 | NC_009963 | TA | 6 | 64343 | 64354 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 159161274 |
93 | NC_009963 | ATT | 4 | 64757 | 64767 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 159161274 |
94 | NC_009963 | AATAA | 3 | 67288 | 67301 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 159161274 |
95 | NC_009963 | TTTA | 3 | 67579 | 67589 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159161274 |
96 | NC_009963 | AT | 7 | 69863 | 69875 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 159161274 |
97 | NC_009963 | GTTTT | 3 | 70924 | 70938 | 15 | 0 % | 80 % | 20 % | 0 % | 6 % | 159161274 |
98 | NC_009963 | TTAT | 3 | 74950 | 74961 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161274 |
99 | NC_009963 | TCTAT | 3 | 74962 | 74975 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 159161274 |
100 | NC_009963 | TCAA | 3 | 74980 | 74991 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 159161274 |
101 | NC_009963 | TTAT | 3 | 75164 | 75175 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161274 |
102 | NC_009963 | TAA | 4 | 76428 | 76440 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 159161274 |
103 | NC_009963 | ATTT | 3 | 77928 | 77938 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159161274 |
104 | NC_009963 | AT | 8 | 78153 | 78167 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | 159161274 |
105 | NC_009963 | GATAT | 3 | 78183 | 78197 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 159161274 |
106 | NC_009963 | ATA | 4 | 78429 | 78439 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 159161274 |
107 | NC_009963 | TAT | 4 | 78580 | 78591 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 159161274 |
108 | NC_009963 | AAAT | 5 | 80036 | 80054 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | 159161274 |
109 | NC_009963 | T | 13 | 80960 | 80972 | 13 | 0 % | 100 % | 0 % | 0 % | 7 % | 159161274 |
110 | NC_009963 | TTTC | 3 | 82406 | 82417 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 159161274 |
111 | NC_009963 | CGAT | 3 | 85848 | 85860 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 159161274 |
112 | NC_009963 | ATAG | 3 | 86707 | 86717 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161274 |
113 | NC_009963 | ATCC | 3 | 93387 | 93398 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 159161299 |
114 | NC_009963 | AAGG | 3 | 93918 | 93928 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 159161299 |
115 | NC_009963 | GAGG | 3 | 96605 | 96616 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 159161299 |
116 | NC_009963 | AGGT | 3 | 96811 | 96822 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159161299 |
117 | NC_009963 | TAAG | 3 | 97936 | 97946 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161299 |
118 | NC_009963 | TGGG | 3 | 98724 | 98736 | 13 | 0 % | 25 % | 75 % | 0 % | 7 % | 159161299 |
119 | NC_009963 | CTT | 4 | 99124 | 99134 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 159161299 |
120 | NC_009963 | TAAC | 3 | 99443 | 99453 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 159161299 |
121 | NC_009963 | ATATT | 3 | 99696 | 99709 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 159161299 |
122 | NC_009963 | AAG | 4 | 101212 | 101222 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 159161299 |
123 | NC_009963 | ATAA | 3 | 101244 | 101254 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159161299 |
124 | NC_009963 | AAAT | 3 | 101956 | 101967 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 159161299 |
125 | NC_009963 | TAAA | 3 | 102064 | 102074 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159161299 |
126 | NC_009963 | ATTAA | 3 | 103074 | 103087 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 159161299 |
127 | NC_009963 | TATT | 3 | 103977 | 103987 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159161299 |
128 | NC_009963 | TGTT | 3 | 104383 | 104394 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 159161299 |
129 | NC_009963 | AATC | 3 | 105085 | 105096 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 159161299 |
130 | NC_009963 | TTA | 4 | 105537 | 105548 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 159161299 |
131 | NC_009963 | TTCT | 3 | 105562 | 105573 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 159161299 |
132 | NC_009963 | AT | 8 | 105639 | 105653 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | 159161299 |
133 | NC_009963 | TTCTTT | 3 | 106531 | 106548 | 18 | 0 % | 83.33 % | 0 % | 16.67 % | 5 % | 159161299 |
134 | NC_009963 | GTT | 4 | 107391 | 107402 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 159161299 |
135 | NC_009963 | TAAA | 3 | 107456 | 107466 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159161299 |
136 | NC_009963 | TTTG | 3 | 107482 | 107492 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 159161299 |
137 | NC_009963 | T | 12 | 107832 | 107843 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | 159161299 |
138 | NC_009963 | CCTTTT | 3 | 109505 | 109521 | 17 | 0 % | 66.67 % | 0 % | 33.33 % | 5 % | 159161299 |
139 | NC_009963 | CTTA | 3 | 110149 | 110159 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159161299 |
140 | NC_009963 | CCTT | 3 | 114167 | 114177 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 159161299 |
141 | NC_009963 | GGAT | 3 | 114697 | 114708 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159161299 |
142 | NC_009963 | A | 13 | 121262 | 121274 | 13 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
143 | NC_009963 | TC | 7 | 121865 | 121877 | 13 | 0 % | 50 % | 0 % | 50 % | 7 % | Non-Coding |
144 | NC_009963 | CATAC | 3 | 122672 | 122685 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |
145 | NC_009963 | AGAT | 3 | 123965 | 123976 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |