Tetra-nucleotide Imperfect Repeats of Ceratophyllum demersum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009962 | AAGT | 3 | 967 | 977 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161140 |
| 2 | NC_009962 | GAAA | 3 | 3131 | 3141 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159161141 |
| 3 | NC_009962 | CTAT | 4 | 4669 | 4684 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 4 | NC_009962 | TGTT | 3 | 4784 | 4796 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 5 | NC_009962 | CCCT | 3 | 4998 | 5008 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | Non-Coding |
| 6 | NC_009962 | ATCT | 4 | 6772 | 6787 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 7 | NC_009962 | GTTA | 3 | 8826 | 8837 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_009962 | ATCT | 3 | 9934 | 9945 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 9 | NC_009962 | AAAG | 3 | 13131 | 13142 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159161146 |
| 10 | NC_009962 | ATTC | 3 | 14342 | 14352 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 11 | NC_009962 | TCAA | 3 | 17017 | 17028 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 159161150 |
| 12 | NC_009962 | TTCT | 3 | 22891 | 22901 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161151 |
| 13 | NC_009962 | TATT | 4 | 22926 | 22941 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 159161151 |
| 14 | NC_009962 | GAAT | 3 | 22998 | 23008 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161151 |
| 15 | NC_009962 | TACA | 3 | 27874 | 27885 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 16 | NC_009962 | AAAT | 3 | 28590 | 28601 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_009962 | TTAG | 3 | 30675 | 30685 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 18 | NC_009962 | GGAA | 3 | 33525 | 33535 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 19 | NC_009962 | ACAA | 3 | 33562 | 33572 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_009962 | GTTA | 3 | 33915 | 33925 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 21 | NC_009962 | GAAA | 3 | 35596 | 35607 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159161156 |
| 22 | NC_009962 | GAAT | 3 | 39641 | 39651 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161159 |
| 23 | NC_009962 | ATTG | 3 | 39843 | 39853 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 159161159 |
| 24 | NC_009962 | AATG | 3 | 41489 | 41500 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 159161160 |
| 25 | NC_009962 | GTTC | 3 | 44573 | 44584 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 159161161 |
| 26 | NC_009962 | TTTC | 3 | 48708 | 48719 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 27 | NC_009962 | ATTG | 3 | 48868 | 48878 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 28 | NC_009962 | GTTT | 4 | 52246 | 52262 | 17 | 0 % | 75 % | 25 % | 0 % | 5 % | Non-Coding |
| 29 | NC_009962 | ACTT | 3 | 52369 | 52380 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 30 | NC_009962 | GATT | 3 | 52502 | 52514 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 31 | NC_009962 | ATCC | 3 | 62510 | 62522 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 159161171 |
| 32 | NC_009962 | AATG | 3 | 64312 | 64323 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 159161172 |
| 33 | NC_009962 | AATC | 3 | 71647 | 71658 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 34 | NC_009962 | TTTA | 3 | 72830 | 72841 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161184 |
| 35 | NC_009962 | TTTC | 3 | 73175 | 73185 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161184 |
| 36 | NC_009962 | GATT | 3 | 79901 | 79911 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 159161184 |
| 37 | NC_009962 | CTTT | 3 | 82400 | 82412 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 159161184 |
| 38 | NC_009962 | TTCT | 3 | 90235 | 90245 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161184 |
| 39 | NC_009962 | CTTT | 3 | 91428 | 91438 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161184 |
| 40 | NC_009962 | TGAT | 3 | 93259 | 93271 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 159161184 |
| 41 | NC_009962 | AATA | 3 | 94142 | 94154 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 159161184 |
| 42 | NC_009962 | TTTC | 3 | 94204 | 94215 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 159161184 |
| 43 | NC_009962 | AAAG | 3 | 97600 | 97610 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159161184 |
| 44 | NC_009962 | TCTA | 3 | 105284 | 105295 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 159161185 |
| 45 | NC_009962 | AAGG | 3 | 105425 | 105435 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 159161185 |
| 46 | NC_009962 | GAGG | 3 | 108162 | 108173 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 159161185 |
| 47 | NC_009962 | AGGT | 3 | 108374 | 108385 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159161185 |
| 48 | NC_009962 | TAAG | 3 | 109494 | 109504 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159161185 |
| 49 | NC_009962 | GGAA | 3 | 111658 | 111668 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 159161185 |
| 50 | NC_009962 | AATT | 3 | 112266 | 112277 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 159161185 |
| 51 | NC_009962 | CCAA | 3 | 112496 | 112507 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 159161185 |
| 52 | NC_009962 | TAAT | 3 | 114319 | 114329 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 159161185 |
| 53 | NC_009962 | TTTG | 3 | 114619 | 114629 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 159161185 |
| 54 | NC_009962 | AATT | 3 | 115007 | 115018 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 159161185 |
| 55 | NC_009962 | CTTT | 3 | 115314 | 115324 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161185 |
| 56 | NC_009962 | AATG | 3 | 115362 | 115373 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 159161185 |
| 57 | NC_009962 | TTGA | 3 | 119566 | 119577 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 159161185 |
| 58 | NC_009962 | TTTC | 3 | 122669 | 122679 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161185 |
| 59 | NC_009962 | TTAT | 3 | 122798 | 122808 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159161185 |
| 60 | NC_009962 | AATC | 3 | 122890 | 122901 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 159161185 |
| 61 | NC_009962 | AGAA | 3 | 125350 | 125360 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159161185 |
| 62 | NC_009962 | TTTA | 3 | 126973 | 126984 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159161185 |
| 63 | NC_009962 | TCTT | 3 | 130404 | 130414 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161185 |
| 64 | NC_009962 | CTAG | 3 | 130756 | 130766 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 159161185 |
| 65 | NC_009962 | TTCC | 3 | 131192 | 131202 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 159161185 |
| 66 | NC_009962 | CTTA | 3 | 133356 | 133366 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159161185 |
| 67 | NC_009962 | CCTT | 3 | 137425 | 137435 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 159161185 |
| 68 | NC_009962 | TTCT | 3 | 145248 | 145258 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161221 |
| 69 | NC_009962 | TGAA | 3 | 148644 | 148655 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 159161222 |
| 70 | NC_009962 | TTCT | 3 | 149492 | 149502 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159161222 |
| 71 | NC_009962 | ATCA | 3 | 149589 | 149601 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 159161222 |
| 72 | NC_009962 | TGAT | 3 | 149684 | 149696 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 159161222 |
| 73 | NC_009962 | AAAG | 3 | 151422 | 151432 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159161222 |
| 74 | NC_009962 | AGTA | 3 | 154371 | 154381 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |