Tetra-nucleotide Imperfect Repeats of Lolium perenne chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009950 | AAGT | 3 | 786 | 796 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159106844 |
| 2 | NC_009950 | ATAG | 3 | 1212 | 1222 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 3 | NC_009950 | ATTT | 3 | 3450 | 3460 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 4 | NC_009950 | ATAA | 3 | 5428 | 5438 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106846 |
| 5 | NC_009950 | TTAA | 3 | 6417 | 6428 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_009950 | TTCT | 3 | 7017 | 7027 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159106847 |
| 7 | NC_009950 | AAAT | 3 | 8638 | 8648 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_009950 | GAAA | 3 | 10244 | 10255 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106850 |
| 9 | NC_009950 | ATTT | 3 | 13031 | 13041 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 10 | NC_009950 | AAGA | 3 | 14181 | 14192 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_009950 | TAGG | 3 | 14583 | 14594 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 12 | NC_009950 | GATA | 3 | 14783 | 14794 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 13 | NC_009950 | CTTT | 3 | 15052 | 15062 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_009950 | ATAC | 4 | 16270 | 16284 | 15 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
| 15 | NC_009950 | AAAT | 3 | 16607 | 16617 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 16 | NC_009950 | ATCA | 3 | 17145 | 17155 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_009950 | ATGA | 3 | 17528 | 17539 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_009950 | AGAA | 3 | 24453 | 24464 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106855 |
| 19 | NC_009950 | TTCA | 3 | 27035 | 27045 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159106856 |
| 20 | NC_009950 | AGAA | 3 | 30245 | 30255 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 21 | NC_009950 | CTTT | 3 | 32019 | 32029 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_009950 | GAAA | 3 | 33141 | 33152 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106860 |
| 23 | NC_009950 | CAAA | 3 | 36488 | 36499 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 24 | NC_009950 | AAGA | 3 | 38981 | 38992 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106864 |
| 25 | NC_009950 | GACT | 3 | 39020 | 39031 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 159106864 |
| 26 | NC_009950 | AATG | 3 | 39380 | 39391 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 159106864 |
| 27 | NC_009950 | ATCA | 3 | 41992 | 42002 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 159106865 |
| 28 | NC_009950 | CTTT | 3 | 42371 | 42382 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 159106865 |
| 29 | NC_009950 | TTCA | 3 | 43673 | 43684 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 30 | NC_009950 | AAAC | 3 | 43698 | 43709 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 31 | NC_009950 | AAAG | 3 | 45507 | 45517 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_009950 | TATT | 3 | 46038 | 46049 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_009950 | TTGA | 3 | 46446 | 46458 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 34 | NC_009950 | CAGA | 3 | 48225 | 48235 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 159106867 |
| 35 | NC_009950 | TTTC | 3 | 53565 | 53576 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 36 | NC_009950 | AATT | 3 | 53640 | 53651 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_009950 | TGCA | 3 | 55205 | 55217 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 159106872 |
| 38 | NC_009950 | AATA | 3 | 55994 | 56005 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 39 | NC_009950 | TAGA | 3 | 56662 | 56673 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 40 | NC_009950 | ATTC | 3 | 59175 | 59185 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_009950 | TTCA | 3 | 63714 | 63725 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 42 | NC_009950 | GAAA | 3 | 64541 | 64551 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 43 | NC_009950 | TTTA | 3 | 64696 | 64706 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 44 | NC_009950 | GAAA | 3 | 65011 | 65022 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106884 |
| 45 | NC_009950 | TAAA | 3 | 65267 | 65278 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 46 | NC_009950 | ATGT | 3 | 67126 | 67136 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 159106887 |
| 47 | NC_009950 | AAGA | 3 | 68131 | 68142 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106887 |
| 48 | NC_009950 | ACTT | 3 | 70303 | 70313 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159106887 |
| 49 | NC_009950 | GAAA | 3 | 71412 | 71423 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106887 |
| 50 | NC_009950 | CCAT | 3 | 72660 | 72672 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 159106887 |
| 51 | NC_009950 | TTTC | 3 | 73796 | 73807 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 159106887 |
| 52 | NC_009950 | AAAG | 3 | 77160 | 77171 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106887 |
| 53 | NC_009950 | TTAT | 3 | 78642 | 78652 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106887 |
| 54 | NC_009950 | TTAT | 3 | 79289 | 79300 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159106887 |
| 55 | NC_009950 | ATTT | 4 | 79473 | 79488 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 159106887 |
| 56 | NC_009950 | TTCT | 3 | 88631 | 88641 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 159106887 |
| 57 | NC_009950 | ATCC | 3 | 93577 | 93588 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 159106927 |
| 58 | NC_009950 | ACGG | 3 | 96691 | 96702 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 159106927 |
| 59 | NC_009950 | AGGT | 3 | 96975 | 96986 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159106927 |
| 60 | NC_009950 | AACG | 3 | 98301 | 98312 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | 159106927 |
| 61 | NC_009950 | AAAG | 4 | 99604 | 99619 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 159106927 |
| 62 | NC_009950 | GAAT | 3 | 101219 | 101229 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159106927 |
| 63 | NC_009950 | AATG | 3 | 103850 | 103860 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159106927 |
| 64 | NC_009950 | TTAA | 3 | 103864 | 103875 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 159106927 |
| 65 | NC_009950 | CAAA | 3 | 104604 | 104615 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 159106927 |
| 66 | NC_009950 | ATTA | 6 | 104688 | 104711 | 24 | 50 % | 50 % | 0 % | 0 % | 8 % | 159106927 |
| 67 | NC_009950 | CTTT | 3 | 104973 | 104984 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 159106927 |
| 68 | NC_009950 | TTTA | 3 | 109383 | 109394 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159106927 |
| 69 | NC_009950 | TAAT | 3 | 111568 | 111580 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 159106927 |
| 70 | NC_009950 | AAAG | 3 | 111718 | 111728 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159106927 |
| 71 | NC_009950 | TAAA | 3 | 112925 | 112936 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 159106927 |
| 72 | NC_009950 | TCTT | 3 | 113113 | 113125 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 159106927 |
| 73 | NC_009950 | ATTC | 3 | 114018 | 114028 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159106927 |
| 74 | NC_009950 | AAAT | 3 | 114432 | 114442 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106927 |
| 75 | NC_009950 | CTTT | 4 | 115628 | 115643 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 159106927 |
| 76 | NC_009950 | TCGT | 3 | 116934 | 116945 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 159106927 |
| 77 | NC_009950 | CTTA | 3 | 117141 | 117151 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159106927 |
| 78 | NC_009950 | CCGT | 3 | 118545 | 118556 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 159106927 |
| 79 | NC_009950 | GGAT | 3 | 121659 | 121670 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159106927 |
| 80 | NC_009950 | AGAA | 3 | 126606 | 126616 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159106922 |
| 81 | NC_009950 | TGAA | 3 | 132114 | 132125 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |