Tetra-nucleotide Imperfect Repeats of Cuscuta obtusiflora chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009949 | ATTT | 3 | 1558 | 1569 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 2 | NC_009949 | CGAT | 3 | 1755 | 1765 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 3 | NC_009949 | ATTT | 3 | 1784 | 1796 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 4 | NC_009949 | AAAT | 3 | 1849 | 1860 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 5 | NC_009949 | TAAT | 4 | 2144 | 2159 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_009949 | ATTT | 3 | 3535 | 3545 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106785 |
| 7 | NC_009949 | CTTA | 3 | 9978 | 9988 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_009949 | GAAA | 3 | 10347 | 10358 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 9 | NC_009949 | GAAA | 3 | 12348 | 12359 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106793 |
| 10 | NC_009949 | TAAA | 3 | 13849 | 13859 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 11 | NC_009949 | AATA | 3 | 15772 | 15782 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106796 |
| 12 | NC_009949 | TATT | 4 | 21551 | 21567 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | Non-Coding |
| 13 | NC_009949 | TGCA | 3 | 25772 | 25784 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 159106802 |
| 14 | NC_009949 | AATA | 3 | 29903 | 29914 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 15 | NC_009949 | ATTT | 3 | 30794 | 30804 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 16 | NC_009949 | ATTA | 3 | 32153 | 32163 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 17 | NC_009949 | AATG | 3 | 32971 | 32981 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159106810 |
| 18 | NC_009949 | TATT | 3 | 33916 | 33927 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_009949 | TAAA | 3 | 35055 | 35065 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106815 |
| 20 | NC_009949 | ATTG | 3 | 37848 | 37859 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 159106817 |
| 21 | NC_009949 | TATT | 3 | 39041 | 39052 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159106817 |
| 22 | NC_009949 | AAAT | 3 | 40353 | 40365 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 159106817 |
| 23 | NC_009949 | AATC | 3 | 41309 | 41319 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 159106817 |
| 24 | NC_009949 | TAAA | 3 | 43921 | 43932 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 159106817 |
| 25 | NC_009949 | AAAG | 3 | 46387 | 46397 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159106817 |
| 26 | NC_009949 | TTGA | 3 | 46867 | 46877 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 159106817 |
| 27 | NC_009949 | TTTA | 3 | 46978 | 46989 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 159106817 |
| 28 | NC_009949 | TTAA | 3 | 49296 | 49307 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 159106817 |
| 29 | NC_009949 | TAAA | 3 | 50601 | 50611 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106817 |
| 30 | NC_009949 | AAAT | 3 | 53480 | 53491 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 159106817 |
| 31 | NC_009949 | ACAA | 3 | 60854 | 60865 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 159106840 |
| 32 | NC_009949 | GAGG | 3 | 61376 | 61387 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 159106840 |
| 33 | NC_009949 | AGGT | 3 | 61582 | 61593 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159106840 |
| 34 | NC_009949 | TAAG | 3 | 62707 | 62717 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159106840 |
| 35 | NC_009949 | AAAT | 3 | 63452 | 63462 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106840 |
| 36 | NC_009949 | TTTG | 3 | 65834 | 65844 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 159106840 |
| 37 | NC_009949 | AAAG | 3 | 65968 | 65978 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159106840 |
| 38 | NC_009949 | ATTT | 3 | 68283 | 68293 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106840 |
| 39 | NC_009949 | ATTT | 3 | 69407 | 69417 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106840 |
| 40 | NC_009949 | TAAA | 3 | 69751 | 69762 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 159106840 |
| 41 | NC_009949 | ATAA | 3 | 70379 | 70389 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106840 |
| 42 | NC_009949 | TTAA | 3 | 70666 | 70676 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 159106840 |
| 43 | NC_009949 | ATTT | 3 | 72032 | 72042 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106840 |
| 44 | NC_009949 | CTTA | 3 | 72777 | 72787 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159106840 |
| 45 | NC_009949 | AGAT | 3 | 80237 | 80248 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 159106842 |