All Imperfect Repeats of Cuscuta obtusiflora chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009949 | AT | 6 | 1318 | 1328 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
2 | NC_009949 | ATTT | 3 | 1558 | 1569 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
3 | NC_009949 | CGAT | 3 | 1755 | 1765 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
4 | NC_009949 | ATTT | 3 | 1784 | 1796 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_009949 | AAAT | 3 | 1849 | 1860 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
6 | NC_009949 | ATT | 4 | 2002 | 2013 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
7 | NC_009949 | TAAT | 4 | 2144 | 2159 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
8 | NC_009949 | TTA | 4 | 2281 | 2292 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
9 | NC_009949 | ATTT | 3 | 3535 | 3545 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106785 |
10 | NC_009949 | T | 14 | 4979 | 4992 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
11 | NC_009949 | T | 14 | 5194 | 5207 | 14 | 0 % | 100 % | 0 % | 0 % | 0 % | 159106786 |
12 | NC_009949 | TA | 7 | 8030 | 8043 | 14 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
13 | NC_009949 | CTTA | 3 | 9978 | 9988 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
14 | NC_009949 | GAAA | 3 | 10347 | 10358 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
15 | NC_009949 | GAAA | 3 | 12348 | 12359 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 159106793 |
16 | NC_009949 | TTA | 4 | 12388 | 12399 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 159106793 |
17 | NC_009949 | GC | 6 | 12673 | 12683 | 11 | 0 % | 0 % | 50 % | 50 % | 9 % | 159106793 |
18 | NC_009949 | AG | 6 | 13422 | 13432 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
19 | NC_009949 | TTC | 4 | 13575 | 13586 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
20 | NC_009949 | TCG | 4 | 13832 | 13843 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | Non-Coding |
21 | NC_009949 | TAAA | 3 | 13849 | 13859 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
22 | NC_009949 | A | 14 | 14265 | 14278 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
23 | NC_009949 | AATA | 3 | 15772 | 15782 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106796 |
24 | NC_009949 | TAT | 4 | 21201 | 21211 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
25 | NC_009949 | TATT | 4 | 21551 | 21567 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | Non-Coding |
26 | NC_009949 | T | 14 | 24634 | 24647 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
27 | NC_009949 | TGCA | 3 | 25772 | 25784 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 159106802 |
28 | NC_009949 | AAC | 4 | 27724 | 27735 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 159106803 |
29 | NC_009949 | GAA | 4 | 28263 | 28274 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 159106803 |
30 | NC_009949 | TAT | 4 | 28664 | 28675 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 159106803 |
31 | NC_009949 | AATA | 3 | 29903 | 29914 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
32 | NC_009949 | T | 13 | 29975 | 29987 | 13 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
33 | NC_009949 | GATTC | 3 | 29993 | 30006 | 14 | 20 % | 40 % | 20 % | 20 % | 7 % | Non-Coding |
34 | NC_009949 | ATTT | 3 | 30794 | 30804 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
35 | NC_009949 | ATTA | 3 | 32153 | 32163 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
36 | NC_009949 | AATG | 3 | 32971 | 32981 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159106810 |
37 | NC_009949 | TA | 6 | 33541 | 33551 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
38 | NC_009949 | TATT | 3 | 33916 | 33927 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
39 | NC_009949 | A | 16 | 34151 | 34166 | 16 | 100 % | 0 % | 0 % | 0 % | 6 % | Non-Coding |
40 | NC_009949 | TAAA | 3 | 35055 | 35065 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106815 |
41 | NC_009949 | TAT | 4 | 35694 | 35704 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
42 | NC_009949 | ACA | 4 | 35888 | 35899 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | Non-Coding |
43 | NC_009949 | ACA | 4 | 36591 | 36602 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 159106817 |
44 | NC_009949 | T | 12 | 37132 | 37143 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | 159106817 |
45 | NC_009949 | A | 15 | 37563 | 37577 | 15 | 100 % | 0 % | 0 % | 0 % | 6 % | 159106817 |
46 | NC_009949 | ATTG | 3 | 37848 | 37859 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 159106817 |
47 | NC_009949 | TA | 6 | 37973 | 37983 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 159106817 |
48 | NC_009949 | T | 15 | 38004 | 38018 | 15 | 0 % | 100 % | 0 % | 0 % | 6 % | 159106817 |
49 | NC_009949 | ATAAA | 3 | 38367 | 38381 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 159106817 |
50 | NC_009949 | GCTGG | 3 | 38712 | 38725 | 14 | 0 % | 20 % | 60 % | 20 % | 7 % | 159106817 |
51 | NC_009949 | TATT | 3 | 39041 | 39052 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 159106817 |
52 | NC_009949 | CTT | 4 | 40002 | 40012 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 159106817 |
53 | NC_009949 | AAAT | 3 | 40353 | 40365 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 159106817 |
54 | NC_009949 | AATC | 3 | 41309 | 41319 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 159106817 |
55 | NC_009949 | A | 13 | 41404 | 41416 | 13 | 100 % | 0 % | 0 % | 0 % | 0 % | 159106817 |
56 | NC_009949 | AAT | 4 | 41503 | 41514 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 159106817 |
57 | NC_009949 | TAAA | 3 | 43921 | 43932 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 159106817 |
58 | NC_009949 | A | 12 | 44219 | 44230 | 12 | 100 % | 0 % | 0 % | 0 % | 0 % | 159106817 |
59 | NC_009949 | TA | 6 | 44233 | 44243 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 159106817 |
60 | NC_009949 | T | 20 | 44997 | 45016 | 20 | 0 % | 100 % | 0 % | 0 % | 5 % | 159106817 |
61 | NC_009949 | AAAAG | 3 | 45290 | 45304 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 159106817 |
62 | NC_009949 | TA | 6 | 45842 | 45852 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 159106817 |
63 | NC_009949 | AAAG | 3 | 46387 | 46397 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159106817 |
64 | NC_009949 | TATTT | 3 | 46451 | 46465 | 15 | 20 % | 80 % | 0 % | 0 % | 0 % | 159106817 |
65 | NC_009949 | TTGA | 3 | 46867 | 46877 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 159106817 |
66 | NC_009949 | TTTA | 3 | 46978 | 46989 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 159106817 |
67 | NC_009949 | TTA | 4 | 48934 | 48946 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 159106817 |
68 | NC_009949 | TTAA | 3 | 49296 | 49307 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 159106817 |
69 | NC_009949 | TAAA | 3 | 50601 | 50611 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106817 |
70 | NC_009949 | TAG | 4 | 50886 | 50897 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 159106817 |
71 | NC_009949 | CAA | 4 | 51416 | 51427 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 159106817 |
72 | NC_009949 | AAAT | 3 | 53480 | 53491 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 159106817 |
73 | NC_009949 | T | 13 | 56977 | 56989 | 13 | 0 % | 100 % | 0 % | 0 % | 7 % | 159106817 |
74 | NC_009949 | TAG | 4 | 59755 | 59765 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 159106840 |
75 | NC_009949 | ACAA | 3 | 60854 | 60865 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 159106840 |
76 | NC_009949 | GAGG | 3 | 61376 | 61387 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 159106840 |
77 | NC_009949 | AGGT | 3 | 61582 | 61593 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 159106840 |
78 | NC_009949 | TAAG | 3 | 62707 | 62717 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 159106840 |
79 | NC_009949 | AAAT | 3 | 63452 | 63462 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106840 |
80 | NC_009949 | GAT | 4 | 64981 | 64992 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 159106840 |
81 | NC_009949 | A | 12 | 65340 | 65351 | 12 | 100 % | 0 % | 0 % | 0 % | 0 % | 159106840 |
82 | NC_009949 | TTTG | 3 | 65834 | 65844 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 159106840 |
83 | NC_009949 | AAAG | 3 | 65968 | 65978 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 159106840 |
84 | NC_009949 | A | 12 | 66908 | 66919 | 12 | 100 % | 0 % | 0 % | 0 % | 0 % | 159106840 |
85 | NC_009949 | A | 14 | 68182 | 68195 | 14 | 100 % | 0 % | 0 % | 0 % | 0 % | 159106840 |
86 | NC_009949 | ATTT | 3 | 68283 | 68293 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106840 |
87 | NC_009949 | AAAGT | 3 | 69004 | 69017 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 159106840 |
88 | NC_009949 | ATT | 4 | 69051 | 69061 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 159106840 |
89 | NC_009949 | ATTT | 3 | 69407 | 69417 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106840 |
90 | NC_009949 | TAT | 4 | 69485 | 69495 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 159106840 |
91 | NC_009949 | TAAA | 3 | 69751 | 69762 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 159106840 |
92 | NC_009949 | CAT | 4 | 69940 | 69951 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 159106840 |
93 | NC_009949 | ATAA | 3 | 70379 | 70389 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 159106840 |
94 | NC_009949 | TTAA | 3 | 70666 | 70676 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 159106840 |
95 | NC_009949 | AAAAT | 3 | 70740 | 70753 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 159106840 |
96 | NC_009949 | AAT | 4 | 70934 | 70945 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 159106840 |
97 | NC_009949 | ATTT | 3 | 72032 | 72042 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 159106840 |
98 | NC_009949 | CTTA | 3 | 72777 | 72787 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 159106840 |
99 | NC_009949 | CTA | 4 | 75729 | 75739 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 159106840 |
100 | NC_009949 | AGAT | 3 | 80237 | 80248 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 159106842 |
101 | NC_009949 | A | 12 | 84292 | 84303 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | 159106842 |
102 | NC_009949 | ACT | 4 | 84596 | 84607 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 159106842 |