Tetra-nucleotide Imperfect Repeats of Cuscuta reflexa chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009766 | ATTT | 3 | 3753 | 3765 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 2 | NC_009766 | ATTT | 3 | 6666 | 6677 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_009766 | ATGA | 3 | 9010 | 9022 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 156618812 |
| 4 | NC_009766 | TTTA | 3 | 10630 | 10640 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_009766 | GAAA | 3 | 12778 | 12789 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 6 | NC_009766 | TTAA | 3 | 12805 | 12817 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 7 | NC_009766 | AAAT | 3 | 18916 | 18926 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 156618817 |
| 8 | NC_009766 | AAAG | 3 | 18951 | 18961 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 156618817 |
| 9 | NC_009766 | TAAA | 4 | 19040 | 19055 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 156618817 |
| 10 | NC_009766 | GAAT | 3 | 19109 | 19119 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 156618817 |
| 11 | NC_009766 | ATTT | 3 | 26399 | 26409 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_009766 | GAAA | 3 | 29030 | 29041 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 156618822 |
| 13 | NC_009766 | TATC | 3 | 30407 | 30418 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_009766 | TGAT | 3 | 34483 | 34495 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 156618826 |
| 15 | NC_009766 | AATG | 3 | 34755 | 34766 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 156618826 |
| 16 | NC_009766 | TAAA | 3 | 38888 | 38899 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 156618827 |
| 17 | NC_009766 | CAAT | 3 | 42663 | 42673 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 18 | NC_009766 | GGGT | 3 | 42838 | 42848 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | Non-Coding |
| 19 | NC_009766 | TAAA | 3 | 42850 | 42861 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_009766 | CAAA | 3 | 42925 | 42936 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_009766 | CATC | 3 | 43314 | 43325 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 22 | NC_009766 | AATA | 3 | 46073 | 46084 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_009766 | TAAA | 3 | 47218 | 47228 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 24 | NC_009766 | ATTT | 3 | 48065 | 48075 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_009766 | TAAA | 4 | 48305 | 48320 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 156618836 |
| 26 | NC_009766 | GTCA | 3 | 49891 | 49901 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 156618837 |
| 27 | NC_009766 | TAAA | 4 | 55008 | 55023 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 156618840 |
| 28 | NC_009766 | AAGA | 3 | 55834 | 55844 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 29 | NC_009766 | GTTT | 3 | 56030 | 56040 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 30 | NC_009766 | TTAT | 3 | 56621 | 56631 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_009766 | TCCA | 3 | 56940 | 56950 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 32 | NC_009766 | TTTA | 3 | 56951 | 56962 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_009766 | TTTA | 3 | 57648 | 57660 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 34 | NC_009766 | AAAC | 3 | 58126 | 58137 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 35 | NC_009766 | TTTA | 3 | 60676 | 60687 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 156618847 |
| 36 | NC_009766 | ATTT | 3 | 60689 | 60699 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 156618847 |
| 37 | NC_009766 | AATA | 3 | 60929 | 60940 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 156618847 |
| 38 | NC_009766 | TTTC | 3 | 61553 | 61563 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 156618847 |
| 39 | NC_009766 | ATTT | 4 | 65003 | 65017 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | 156618847 |
| 40 | NC_009766 | TTTC | 3 | 65272 | 65282 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 156618847 |
| 41 | NC_009766 | ATTC | 3 | 67345 | 67357 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 156618847 |
| 42 | NC_009766 | TTTA | 3 | 71910 | 71920 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 156618847 |
| 43 | NC_009766 | ATTG | 3 | 72257 | 72268 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 156618847 |
| 44 | NC_009766 | AAAT | 3 | 72665 | 72675 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 156618847 |
| 45 | NC_009766 | ATTC | 3 | 72700 | 72710 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 156618847 |
| 46 | NC_009766 | TTTC | 3 | 79165 | 79176 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 156618847 |
| 47 | NC_009766 | CGAT | 3 | 82590 | 82602 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 156618847 |
| 48 | NC_009766 | CCCT | 3 | 86500 | 86510 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 156618847 |
| 49 | NC_009766 | ATCC | 3 | 90190 | 90201 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 156618875 |
| 50 | NC_009766 | AAGG | 3 | 90721 | 90731 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 156618875 |
| 51 | NC_009766 | GAGG | 3 | 93408 | 93419 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 156618875 |
| 52 | NC_009766 | AGGT | 3 | 93614 | 93625 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 156618875 |
| 53 | NC_009766 | TAAG | 3 | 94739 | 94749 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 156618875 |
| 54 | NC_009766 | TGGG | 3 | 95541 | 95553 | 13 | 0 % | 25 % | 75 % | 0 % | 7 % | 156618875 |
| 55 | NC_009766 | ATTT | 3 | 96238 | 96249 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 156618875 |
| 56 | NC_009766 | AAAT | 3 | 97163 | 97173 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 156618875 |
| 57 | NC_009766 | AATC | 3 | 101180 | 101191 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 156618875 |
| 58 | NC_009766 | AGAA | 3 | 101556 | 101568 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 156618875 |
| 59 | NC_009766 | TTTG | 3 | 103580 | 103590 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 156618875 |
| 60 | NC_009766 | CTTA | 3 | 106241 | 106251 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 156618875 |
| 61 | NC_009766 | CCTT | 3 | 110259 | 110269 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 156618875 |
| 62 | NC_009766 | GGAT | 3 | 110789 | 110800 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 156618875 |
| 63 | NC_009766 | ATCT | 3 | 115668 | 115679 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 64 | NC_009766 | AGAT | 3 | 120110 | 120121 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |