Tetra-nucleotide Imperfect Repeats of Cycas taitungensis chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009618 | CATT | 4 | 2978 | 2993 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | 150251437 |
| 2 | NC_009618 | ATCT | 3 | 3483 | 3493 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 3 | NC_009618 | TCTA | 4 | 5206 | 5221 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | 150251438 |
| 4 | NC_009618 | CCTG | 3 | 12799 | 12810 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 150251443 |
| 5 | NC_009618 | TTCA | 3 | 16840 | 16851 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 150251448 |
| 6 | NC_009618 | ATTT | 3 | 17258 | 17268 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 150251448 |
| 7 | NC_009618 | GAAA | 3 | 17586 | 17597 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_009618 | TCAA | 3 | 17994 | 18005 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 150251449 |
| 9 | NC_009618 | ATAG | 4 | 38031 | 38046 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 10 | NC_009618 | AATG | 3 | 41813 | 41824 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 150251464 |
| 11 | NC_009618 | AAAG | 3 | 47111 | 47121 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 12 | NC_009618 | AAGA | 3 | 48413 | 48424 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 13 | NC_009618 | AAGG | 3 | 66851 | 66863 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | Non-Coding |
| 14 | NC_009618 | GAAT | 3 | 69840 | 69851 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 15 | NC_009618 | TTCT | 4 | 70870 | 70884 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 150251491 |
| 16 | NC_009618 | AAGT | 3 | 73321 | 73331 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_009618 | TCTT | 3 | 77973 | 77985 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 150251522 |
| 18 | NC_009618 | AGAT | 3 | 81051 | 81062 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 150251522 |
| 19 | NC_009618 | TCAT | 3 | 90567 | 90579 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 150251522 |
| 20 | NC_009618 | ATAG | 3 | 90673 | 90684 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 150251522 |
| 21 | NC_009618 | ATCG | 3 | 92135 | 92146 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 150251522 |
| 22 | NC_009618 | TTCG | 3 | 95296 | 95306 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 150251522 |
| 23 | NC_009618 | TTTC | 3 | 99884 | 99895 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 150251522 |
| 24 | NC_009618 | AGAT | 3 | 101487 | 101497 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 150251522 |
| 25 | NC_009618 | TTTC | 3 | 104168 | 104178 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 150251557 |
| 26 | NC_009618 | CTTT | 3 | 105082 | 105092 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 150251557 |
| 27 | NC_009618 | TTCT | 3 | 107320 | 107332 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 150251557 |
| 28 | NC_009618 | ATCC | 3 | 107851 | 107862 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 150251557 |
| 29 | NC_009618 | GAGG | 3 | 111065 | 111076 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 150251557 |
| 30 | NC_009618 | AGGT | 3 | 111279 | 111290 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 150251557 |
| 31 | NC_009618 | GATC | 3 | 114296 | 114307 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 150251557 |
| 32 | NC_009618 | ATAG | 4 | 114865 | 114880 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 150251557 |
| 33 | NC_009618 | CTAT | 4 | 114877 | 114892 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | 150251557 |
| 34 | NC_009618 | GAAA | 3 | 115922 | 115933 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 150251557 |
| 35 | NC_009618 | TCAT | 3 | 118145 | 118155 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 150251557 |
| 36 | NC_009618 | TAGA | 3 | 118365 | 118376 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 150251557 |
| 37 | NC_009618 | CTTT | 3 | 120928 | 120938 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 150251557 |
| 38 | NC_009618 | GATA | 3 | 123778 | 123789 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 150251557 |
| 39 | NC_009618 | TATT | 3 | 123794 | 123804 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 150251557 |
| 40 | NC_009618 | TATC | 7 | 129773 | 129800 | 28 | 25 % | 50 % | 0 % | 25 % | 7 % | 150251557 |
| 41 | NC_009618 | ATAG | 4 | 129806 | 129821 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 150251557 |
| 42 | NC_009618 | CTTT | 3 | 130599 | 130610 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 150251557 |
| 43 | NC_009618 | TTTC | 3 | 130748 | 130758 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 150251557 |
| 44 | NC_009618 | CTTT | 3 | 133724 | 133734 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 150251557 |
| 45 | NC_009618 | CTTT | 3 | 134475 | 134486 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 150251557 |
| 46 | NC_009618 | ATCG | 3 | 138231 | 138242 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 150251557 |
| 47 | NC_009618 | ATAG | 4 | 138370 | 138385 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 150251557 |
| 48 | NC_009618 | CTAT | 4 | 138382 | 138397 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | 150251557 |
| 49 | NC_009618 | CTAC | 3 | 141970 | 141981 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 150251557 |
| 50 | NC_009618 | GGAT | 3 | 145400 | 145411 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 150251557 |
| 51 | NC_009618 | AGAA | 3 | 145930 | 145942 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 150251557 |
| 52 | NC_009618 | AAAG | 3 | 148170 | 148180 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 150251557 |
| 53 | NC_009618 | CCAA | 3 | 148859 | 148871 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 150251557 |
| 54 | NC_009618 | TCTA | 3 | 150991 | 151003 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 150251554 |
| 55 | NC_009618 | CGAA | 3 | 157956 | 157966 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 150251556 |
| 56 | NC_009618 | GAAA | 3 | 162008 | 162019 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 150251556 |
| 57 | NC_009618 | CTTT | 3 | 162134 | 162144 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 150251556 |
| 58 | NC_009618 | ATCT | 3 | 162576 | 162587 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 59 | NC_009618 | ATGA | 3 | 162683 | 162695 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |