Tetra-nucleotide Imperfect Repeats of Dioscorea elephantipes chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009601 | AAGT | 3 | 782 | 792 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 149390335 |
| 2 | NC_009601 | TCCA | 3 | 1194 | 1205 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 3 | NC_009601 | TATT | 4 | 4210 | 4225 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 4 | NC_009601 | CAAT | 3 | 4318 | 4329 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | Non-Coding |
| 5 | NC_009601 | ATGA | 3 | 4967 | 4978 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 6 | NC_009601 | ACAT | 4 | 7470 | 7484 | 15 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
| 7 | NC_009601 | AAAT | 3 | 8910 | 8921 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 8 | NC_009601 | GAAA | 3 | 8972 | 8982 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 9 | NC_009601 | TTAA | 3 | 11557 | 11568 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 149390340 |
| 10 | NC_009601 | TTCA | 3 | 12027 | 12038 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 149390340 |
| 11 | NC_009601 | GAAA | 3 | 13154 | 13166 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 12 | NC_009601 | TTTG | 3 | 15335 | 15345 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 13 | NC_009601 | TTTA | 3 | 21582 | 21592 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 149390345 |
| 14 | NC_009601 | TTCA | 3 | 21653 | 21664 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 149390345 |
| 15 | NC_009601 | AATT | 3 | 21690 | 21701 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 149390345 |
| 16 | NC_009601 | TTTG | 3 | 22063 | 22074 | 12 | 0 % | 75 % | 25 % | 0 % | 0 % | 149390345 |
| 17 | NC_009601 | GAAA | 3 | 25266 | 25278 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 149390346 |
| 18 | NC_009601 | TATC | 3 | 26497 | 26508 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 19 | NC_009601 | TTTC | 3 | 26872 | 26883 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 20 | NC_009601 | AACA | 3 | 27930 | 27940 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 21 | NC_009601 | GAAT | 3 | 28550 | 28560 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_009601 | TTGT | 3 | 29197 | 29207 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 23 | NC_009601 | TTTC | 3 | 31131 | 31141 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_009601 | ATTT | 3 | 32019 | 32030 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_009601 | TCTA | 3 | 32250 | 32260 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 26 | NC_009601 | GAAA | 3 | 34102 | 34113 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 149390350 |
| 27 | NC_009601 | TCTA | 4 | 35396 | 35411 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 28 | NC_009601 | AAAT | 3 | 35452 | 35463 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_009601 | AAAT | 3 | 36231 | 36241 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_009601 | AACT | 3 | 36945 | 36956 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 31 | NC_009601 | AAGA | 3 | 39427 | 39438 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 149390354 |
| 32 | NC_009601 | AATG | 3 | 39826 | 39837 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 149390354 |
| 33 | NC_009601 | TTAA | 3 | 42013 | 42024 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_009601 | TTTC | 3 | 42933 | 42944 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 157011968 |
| 35 | NC_009601 | GTAA | 3 | 43917 | 43927 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 157011968 |
| 36 | NC_009601 | GAAA | 3 | 44538 | 44549 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_009601 | TCTT | 3 | 44660 | 44671 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 38 | NC_009601 | TAAA | 3 | 47543 | 47553 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 39 | NC_009601 | GAGT | 3 | 51610 | 51620 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | Non-Coding |
| 40 | NC_009601 | TTCT | 3 | 56115 | 56125 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_009601 | TATT | 3 | 56289 | 56300 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 42 | NC_009601 | GTTA | 3 | 56445 | 56455 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 43 | NC_009601 | TATT | 3 | 56532 | 56543 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 149390363 |
| 44 | NC_009601 | AATG | 3 | 60946 | 60957 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 149390366 |
| 45 | NC_009601 | TTTC | 3 | 62593 | 62603 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_009601 | ATAA | 4 | 62697 | 62711 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 47 | NC_009601 | ATTC | 3 | 64304 | 64315 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 48 | NC_009601 | AATA | 3 | 66414 | 66425 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 149390375 |
| 49 | NC_009601 | ATTC | 3 | 67516 | 67527 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 50 | NC_009601 | ATAA | 3 | 68772 | 68782 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 149390419 |
| 51 | NC_009601 | AAGA | 3 | 69861 | 69871 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 149390419 |
| 52 | NC_009601 | TTTC | 3 | 73405 | 73416 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 149390419 |
| 53 | NC_009601 | ACAA | 3 | 73919 | 73930 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 149390419 |
| 54 | NC_009601 | TCTA | 3 | 75300 | 75311 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 149390419 |
| 55 | NC_009601 | GAAA | 3 | 79693 | 79704 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 149390419 |
| 56 | NC_009601 | AGAA | 3 | 79717 | 79728 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 149390419 |
| 57 | NC_009601 | TTCT | 3 | 80955 | 80966 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 149390419 |
| 58 | NC_009601 | TGAT | 3 | 89571 | 89583 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 149390419 |
| 59 | NC_009601 | AATA | 3 | 90436 | 90448 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 149390419 |
| 60 | NC_009601 | TTTC | 3 | 90498 | 90509 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 149390419 |
| 61 | NC_009601 | ATCC | 3 | 101456 | 101467 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 149390420 |
| 62 | NC_009601 | GAAA | 3 | 101690 | 101701 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 149390420 |
| 63 | NC_009601 | GAGG | 3 | 104690 | 104701 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 149390420 |
| 64 | NC_009601 | AGGT | 3 | 104907 | 104918 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 149390420 |
| 65 | NC_009601 | TAAG | 3 | 106029 | 106039 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 149390420 |
| 66 | NC_009601 | GGAA | 3 | 108085 | 108095 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 149390420 |
| 67 | NC_009601 | AAAG | 4 | 110876 | 110891 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 149390420 |
| 68 | NC_009601 | AATA | 3 | 111197 | 111208 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 149390420 |
| 69 | NC_009601 | ATTT | 3 | 113736 | 113746 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 149390420 |
| 70 | NC_009601 | GACT | 3 | 113984 | 113994 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 149390420 |
| 71 | NC_009601 | AATT | 3 | 114063 | 114074 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 149390420 |
| 72 | NC_009601 | GAAA | 3 | 115965 | 115976 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 149390420 |
| 73 | NC_009601 | GAAA | 3 | 122271 | 122283 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 149390420 |
| 74 | NC_009601 | CTTT | 3 | 124570 | 124580 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 149390420 |
| 75 | NC_009601 | GGCG | 3 | 126990 | 127000 | 11 | 0 % | 0 % | 75 % | 25 % | 9 % | 149390420 |
| 76 | NC_009601 | TTCC | 3 | 127292 | 127302 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 149390420 |
| 77 | NC_009601 | CTTA | 3 | 129348 | 129358 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 149390420 |
| 78 | NC_009601 | GGAT | 3 | 133920 | 133931 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 149390420 |
| 79 | NC_009601 | ATTT | 3 | 136803 | 136814 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 149390420 |
| 80 | NC_009601 | TAGA | 3 | 137674 | 137684 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 149390420 |
| 81 | NC_009601 | TGAA | 3 | 144877 | 144888 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 149390416 |
| 82 | NC_009601 | ATCA | 3 | 145804 | 145816 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 149390416 |
| 83 | NC_009601 | TGAT | 3 | 145899 | 145911 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 149390416 |
| 84 | NC_009601 | ATTT | 3 | 148628 | 148639 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 149390416 |
| 85 | NC_009601 | CATT | 3 | 152444 | 152454 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |