Tetra-nucleotide Imperfect Repeats of Illicium oligandrum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009600 | CAAT | 3 | 378 | 389 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 2 | NC_009600 | AAGT | 3 | 1631 | 1641 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 149390422 |
| 3 | NC_009600 | GATC | 3 | 4425 | 4435 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 4 | NC_009600 | AGAT | 3 | 5141 | 5152 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_009600 | ACTC | 3 | 6091 | 6101 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 149390424 |
| 6 | NC_009600 | CTTT | 3 | 6475 | 6486 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 149390424 |
| 7 | NC_009600 | ATAG | 3 | 7456 | 7467 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_009600 | AGGG | 3 | 8760 | 8770 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | Non-Coding |
| 9 | NC_009600 | TATT | 3 | 9753 | 9764 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_009600 | ATAA | 4 | 14518 | 14533 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 149390428 |
| 11 | NC_009600 | ATTT | 3 | 14832 | 14842 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_009600 | GAAA | 3 | 15080 | 15091 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 13 | NC_009600 | CAAG | 3 | 15193 | 15203 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 14 | NC_009600 | TTTC | 3 | 15610 | 15621 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_009600 | AATA | 3 | 15805 | 15817 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 16 | NC_009600 | AATC | 3 | 18413 | 18424 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 149390432 |
| 17 | NC_009600 | GAAT | 3 | 24605 | 24615 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 149390433 |
| 18 | NC_009600 | GAAA | 3 | 28112 | 28124 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 149390434 |
| 19 | NC_009600 | TAAA | 3 | 29934 | 29946 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 20 | NC_009600 | CTAT | 3 | 31974 | 31986 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 21 | NC_009600 | AACT | 3 | 32088 | 32098 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_009600 | TGTA | 3 | 34550 | 34561 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 23 | NC_009600 | GAAA | 3 | 37344 | 37355 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 149390438 |
| 24 | NC_009600 | ATTA | 3 | 38508 | 38519 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_009600 | AATG | 3 | 43210 | 43221 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 149390442 |
| 26 | NC_009600 | TCTT | 4 | 46327 | 46342 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 149390443 |
| 27 | NC_009600 | CTTT | 3 | 47259 | 47269 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 149390443 |
| 28 | NC_009600 | TTTA | 3 | 48424 | 48435 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_009600 | ATGA | 3 | 50175 | 50187 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |
| 30 | NC_009600 | TTGA | 3 | 50283 | 50295 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 31 | NC_009600 | TAGA | 3 | 51264 | 51275 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 32 | NC_009600 | TGCA | 3 | 51601 | 51611 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 33 | NC_009600 | TCAG | 3 | 54309 | 54319 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 34 | NC_009600 | ACCC | 3 | 54590 | 54601 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | Non-Coding |
| 35 | NC_009600 | CTTT | 3 | 55893 | 55903 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 36 | NC_009600 | GTTA | 3 | 60678 | 60688 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_009600 | AATG | 3 | 65534 | 65545 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 149390454 |
| 38 | NC_009600 | CTTT | 3 | 69328 | 69338 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 39 | NC_009600 | AATG | 3 | 76021 | 76032 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 149390502 |
| 40 | NC_009600 | TATT | 3 | 80327 | 80337 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 149390502 |
| 41 | NC_009600 | AAAT | 3 | 81774 | 81786 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 149390502 |
| 42 | NC_009600 | TACG | 3 | 82914 | 82926 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 149390502 |
| 43 | NC_009600 | AATA | 3 | 84501 | 84511 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 149390502 |
| 44 | NC_009600 | GAAA | 3 | 85042 | 85052 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 149390502 |
| 45 | NC_009600 | ATCT | 3 | 85713 | 85724 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 149390502 |
| 46 | NC_009600 | GTTC | 3 | 85987 | 85998 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 149390502 |
| 47 | NC_009600 | AAAT | 3 | 86611 | 86621 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 149390502 |
| 48 | NC_009600 | CATT | 3 | 86683 | 86693 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 149390502 |
| 49 | NC_009600 | TTTA | 3 | 88637 | 88647 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 149390502 |
| 50 | NC_009600 | TTCT | 3 | 91722 | 91732 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 149390502 |
| 51 | NC_009600 | AAAT | 3 | 93961 | 93972 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 149390502 |
| 52 | NC_009600 | TGAT | 3 | 94767 | 94779 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 149390502 |
| 53 | NC_009600 | AATA | 3 | 95632 | 95644 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 149390502 |
| 54 | NC_009600 | TTTC | 3 | 95694 | 95705 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 149390502 |
| 55 | NC_009600 | TTTC | 3 | 98240 | 98251 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 149390502 |
| 56 | NC_009600 | AAAT | 3 | 103233 | 103244 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 149390502 |
| 57 | NC_009600 | ATCC | 3 | 106201 | 106212 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 149390502 |
| 58 | NC_009600 | TCTA | 3 | 106589 | 106600 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 149390502 |
| 59 | NC_009600 | AAGG | 3 | 106728 | 106738 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 149390502 |
| 60 | NC_009600 | GAGG | 3 | 109458 | 109469 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 149390502 |
| 61 | NC_009600 | AGGT | 3 | 109670 | 109681 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 149390502 |
| 62 | NC_009600 | TAAG | 3 | 110790 | 110800 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 149390502 |
| 63 | NC_009600 | ATTT | 4 | 111850 | 111866 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | 149390502 |
| 64 | NC_009600 | GGAA | 3 | 112907 | 112917 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 149390502 |
| 65 | NC_009600 | TAAA | 3 | 113170 | 113181 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 149390502 |
| 66 | NC_009600 | GAAT | 3 | 113532 | 113542 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 149390502 |
| 67 | NC_009600 | ATCC | 3 | 124868 | 124880 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 149390502 |
| 68 | NC_009600 | GTTC | 3 | 125114 | 125124 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 149390502 |
| 69 | NC_009600 | GAAT | 3 | 125597 | 125607 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 149390502 |
| 70 | NC_009600 | TAAT | 3 | 129810 | 129821 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 149390502 |
| 71 | NC_009600 | CATT | 3 | 129990 | 130001 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 149390502 |
| 72 | NC_009600 | CTTT | 3 | 130597 | 130609 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 149390502 |
| 73 | NC_009600 | TTCC | 3 | 133693 | 133703 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 149390502 |
| 74 | NC_009600 | AATT | 3 | 134495 | 134505 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 149390502 |
| 75 | NC_009600 | AAAT | 4 | 134744 | 134760 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | 149390502 |
| 76 | NC_009600 | CTTA | 3 | 135810 | 135820 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 149390502 |
| 77 | NC_009600 | CCTT | 3 | 139873 | 139883 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 149390502 |
| 78 | NC_009600 | GGAT | 3 | 140399 | 140410 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 149390502 |
| 79 | NC_009600 | TAAA | 4 | 144248 | 144263 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 149390502 |