Tetra-nucleotide Imperfect Repeats of Lepidium virginicum chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009273 | TACC | 3 | 487 | 497 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 139388890 |
| 2 | NC_009273 | TTTA | 3 | 3651 | 3662 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_009273 | CTAT | 3 | 4315 | 4326 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_009273 | TTCA | 3 | 4871 | 4882 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 139388892 |
| 5 | NC_009273 | TGTA | 3 | 6182 | 6193 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 6 | NC_009273 | TTCT | 3 | 7504 | 7515 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139388894 |
| 7 | NC_009273 | AGAA | 3 | 8870 | 8881 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_009273 | TTGT | 3 | 11452 | 11462 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 139388896 |
| 9 | NC_009273 | AAAT | 3 | 13329 | 13340 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_009273 | TAAT | 3 | 13381 | 13392 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 11 | NC_009273 | TTTA | 3 | 14626 | 14637 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 12 | NC_009273 | TTCA | 3 | 21860 | 21871 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 139388901 |
| 13 | NC_009273 | TTAA | 3 | 26848 | 26859 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 14 | NC_009273 | CAAA | 3 | 28125 | 28136 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 15 | NC_009273 | AAGA | 3 | 29944 | 29955 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_009273 | ATTT | 3 | 30373 | 30383 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 17 | NC_009273 | ATAA | 3 | 30556 | 30567 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_009273 | ATTC | 3 | 31209 | 31221 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 19 | NC_009273 | AAAG | 3 | 32029 | 32040 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 20 | NC_009273 | GAAA | 3 | 33822 | 33833 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 139388906 |
| 21 | NC_009273 | TAAA | 3 | 35328 | 35340 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 22 | NC_009273 | ATAA | 4 | 35783 | 35798 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 23 | NC_009273 | AAAC | 3 | 36409 | 36420 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 24 | NC_009273 | TAGA | 3 | 41973 | 41985 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |
| 25 | NC_009273 | AAAG | 3 | 42219 | 42230 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 26 | NC_009273 | TTAA | 5 | 42625 | 42644 | 20 | 50 % | 50 % | 0 % | 0 % | 10 % | 157011963 |
| 27 | NC_009273 | GTAA | 3 | 44132 | 44142 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 157011963 |
| 28 | NC_009273 | TTGT | 3 | 46235 | 46246 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 29 | NC_009273 | CTAA | 3 | 49053 | 49064 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 139388914 |
| 30 | NC_009273 | GATT | 3 | 50314 | 50325 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 31 | NC_009273 | GATA | 3 | 50807 | 50818 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 32 | NC_009273 | CTTT | 3 | 51970 | 51981 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 33 | NC_009273 | AATT | 3 | 56709 | 56720 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_009273 | ATTT | 3 | 59387 | 59398 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_009273 | TGAA | 3 | 60060 | 60072 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 139388921 |
| 36 | NC_009273 | TAAA | 4 | 62986 | 63001 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 37 | NC_009273 | CAGC | 3 | 63789 | 63800 | 12 | 25 % | 0 % | 25 % | 50 % | 8 % | 139388926 |
| 38 | NC_009273 | TTTA | 3 | 64743 | 64754 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 39 | NC_009273 | TAAA | 3 | 64895 | 64907 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 40 | NC_009273 | TAGA | 3 | 65166 | 65176 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 41 | NC_009273 | TCTT | 3 | 69163 | 69173 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 42 | NC_009273 | AAAG | 3 | 70986 | 70996 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 139388957 |
| 43 | NC_009273 | TTGA | 3 | 71067 | 71078 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 139388957 |
| 44 | NC_009273 | TGTC | 3 | 71294 | 71304 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 139388957 |
| 45 | NC_009273 | TGAA | 3 | 71994 | 72004 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 139388957 |
| 46 | NC_009273 | GCTG | 3 | 73123 | 73135 | 13 | 0 % | 25 % | 50 % | 25 % | 7 % | 139388957 |
| 47 | NC_009273 | AGAA | 3 | 73294 | 73305 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 139388957 |
| 48 | NC_009273 | TCTT | 4 | 73885 | 73900 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 139388957 |
| 49 | NC_009273 | TTTC | 4 | 82197 | 82212 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 139388957 |
| 50 | NC_009273 | CAAT | 3 | 82754 | 82764 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 139388957 |
| 51 | NC_009273 | AATT | 3 | 83086 | 83096 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 139388957 |
| 52 | NC_009273 | TTTC | 3 | 83784 | 83794 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139388957 |
| 53 | NC_009273 | TTCT | 3 | 87814 | 87824 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139388957 |
| 54 | NC_009273 | CTTT | 3 | 89025 | 89035 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139388957 |
| 55 | NC_009273 | TGAT | 3 | 90880 | 90892 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 139388957 |
| 56 | NC_009273 | AATA | 3 | 91727 | 91739 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 139388957 |
| 57 | NC_009273 | TTAG | 3 | 99637 | 99649 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 139388934 |
| 58 | NC_009273 | ATCC | 3 | 102931 | 102942 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 139388934 |
| 59 | NC_009273 | CTAT | 3 | 103326 | 103337 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 139388934 |
| 60 | NC_009273 | GAGG | 3 | 106178 | 106189 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 139388934 |
| 61 | NC_009273 | AGGT | 3 | 106390 | 106401 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 139388934 |
| 62 | NC_009273 | TAAG | 3 | 107510 | 107520 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 139388934 |
| 63 | NC_009273 | GAAA | 3 | 110339 | 110350 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 139388934 |
| 64 | NC_009273 | AAAC | 3 | 111319 | 111329 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 139388934 |
| 65 | NC_009273 | ATAG | 3 | 112421 | 112432 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 139388934 |
| 66 | NC_009273 | ATTT | 3 | 112632 | 112642 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 139388934 |
| 67 | NC_009273 | AAAT | 3 | 113375 | 113385 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 139388934 |
| 68 | NC_009273 | TTAA | 3 | 114383 | 114395 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 139388934 |
| 69 | NC_009273 | TATT | 3 | 114713 | 114724 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139388934 |
| 70 | NC_009273 | TCTT | 3 | 120030 | 120041 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139388934 |
| 71 | NC_009273 | TAAA | 3 | 121104 | 121114 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 139388934 |
| 72 | NC_009273 | AATT | 3 | 123512 | 123523 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 139388934 |
| 73 | NC_009273 | AGCC | 3 | 123616 | 123626 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | 139388934 |
| 74 | NC_009273 | CTTT | 3 | 123758 | 123768 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139388934 |
| 75 | NC_009273 | TCAA | 3 | 124582 | 124592 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 139388934 |
| 76 | NC_009273 | ATTT | 3 | 126384 | 126394 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 139388934 |
| 77 | NC_009273 | TCTT | 3 | 127176 | 127186 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139388934 |
| 78 | NC_009273 | TATC | 3 | 127307 | 127319 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 139388934 |
| 79 | NC_009273 | CTTA | 3 | 131259 | 131269 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 139388934 |
| 80 | NC_009273 | GGAT | 3 | 135837 | 135848 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 139388934 |
| 81 | NC_009273 | AAAT | 3 | 139734 | 139745 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 139388934 |
| 82 | NC_009273 | AATA | 3 | 139746 | 139757 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 139388934 |
| 83 | NC_009273 | CATA | 3 | 140827 | 140838 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 139388934 |
| 84 | NC_009273 | ATCA | 3 | 147929 | 147941 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 139388976 |
| 85 | NC_009273 | TGAT | 3 | 148024 | 148036 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 139388976 |
| 86 | NC_009273 | AAAG | 3 | 149744 | 149754 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 139388976 |
| 87 | NC_009273 | TATT | 3 | 150827 | 150838 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139388976 |