Tetra-nucleotide Imperfect Repeats of Crucihimalaya wallichii chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009271 | TACC | 3 | 578 | 588 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 139389781 |
2 | NC_009271 | TTTA | 3 | 3753 | 3764 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
3 | NC_009271 | TTTA | 3 | 4608 | 4618 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
4 | NC_009271 | ATTC | 3 | 5492 | 5502 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 139389783 |
5 | NC_009271 | TTCT | 3 | 7489 | 7500 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139389785 |
6 | NC_009271 | TCTT | 3 | 8170 | 8180 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
7 | NC_009271 | GTTT | 3 | 9838 | 9849 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 139389786 |
8 | NC_009271 | TTTC | 3 | 12018 | 12029 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139389787 |
9 | NC_009271 | TTAT | 3 | 12048 | 12059 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 139389787 |
10 | NC_009271 | AAAT | 3 | 13312 | 13323 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
11 | NC_009271 | TCAA | 3 | 15930 | 15941 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 139389791 |
12 | NC_009271 | TTCA | 3 | 21840 | 21851 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 139389792 |
13 | NC_009271 | TATT | 3 | 28929 | 28940 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
14 | NC_009271 | AAAG | 5 | 30046 | 30064 | 19 | 75 % | 0 % | 25 % | 0 % | 10 % | Non-Coding |
15 | NC_009271 | TTCT | 3 | 31129 | 31141 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
16 | NC_009271 | GAAA | 3 | 33839 | 33850 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 139389797 |
17 | NC_009271 | GGGA | 3 | 33959 | 33970 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 139389797 |
18 | NC_009271 | AAAT | 3 | 35790 | 35801 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
19 | NC_009271 | TAGA | 3 | 41947 | 41958 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
20 | NC_009271 | TTAA | 5 | 42556 | 42575 | 20 | 50 % | 50 % | 0 % | 0 % | 10 % | 157011967 |
21 | NC_009271 | GTAA | 3 | 44066 | 44076 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 157011967 |
22 | NC_009271 | AACT | 3 | 45605 | 45616 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
23 | NC_009271 | TAAA | 3 | 46120 | 46130 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
24 | NC_009271 | TTGT | 3 | 46197 | 46208 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
25 | NC_009271 | GATT | 3 | 50226 | 50237 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
26 | NC_009271 | GATA | 3 | 50697 | 50708 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
27 | NC_009271 | AGAA | 3 | 50828 | 50839 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
28 | NC_009271 | ATTT | 3 | 56478 | 56488 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
29 | NC_009271 | TATT | 3 | 60248 | 60259 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
30 | NC_009271 | TAAA | 4 | 62968 | 62983 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
31 | NC_009271 | CAGC | 3 | 63803 | 63814 | 12 | 25 % | 0 % | 25 % | 50 % | 8 % | 139389817 |
32 | NC_009271 | TAGA | 3 | 65157 | 65167 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
33 | NC_009271 | AAAG | 3 | 66685 | 66695 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
34 | NC_009271 | TTAT | 3 | 68311 | 68322 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139389824 |
35 | NC_009271 | TTGA | 3 | 71062 | 71073 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 139389848 |
36 | NC_009271 | TGTC | 3 | 71294 | 71304 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 139389848 |
37 | NC_009271 | GCTG | 3 | 73127 | 73139 | 13 | 0 % | 25 % | 50 % | 25 % | 7 % | 139389848 |
38 | NC_009271 | AGAA | 3 | 73298 | 73309 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 139389848 |
39 | NC_009271 | CTTT | 3 | 73885 | 73896 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139389848 |
40 | NC_009271 | TTGT | 3 | 79283 | 79294 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 139389848 |
41 | NC_009271 | TTCA | 3 | 79795 | 79806 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 139389848 |
42 | NC_009271 | TCTT | 4 | 82261 | 82276 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 139389848 |
43 | NC_009271 | ATCT | 3 | 82384 | 82396 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 139389848 |
44 | NC_009271 | TTCT | 3 | 82491 | 82501 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139389848 |
45 | NC_009271 | CAAT | 3 | 82815 | 82825 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 139389848 |
46 | NC_009271 | AATT | 3 | 83147 | 83157 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 139389848 |
47 | NC_009271 | TTTC | 3 | 83845 | 83855 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139389848 |
48 | NC_009271 | TTCT | 3 | 87908 | 87918 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139389848 |
49 | NC_009271 | CTTT | 3 | 89119 | 89129 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139389848 |
50 | NC_009271 | TGAT | 3 | 90986 | 90998 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 139389848 |
51 | NC_009271 | AATA | 3 | 91833 | 91845 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 139389848 |
52 | NC_009271 | TATT | 3 | 98945 | 98955 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 139389825 |
53 | NC_009271 | ATCC | 3 | 103063 | 103074 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 139389825 |
54 | NC_009271 | CTAT | 3 | 103458 | 103469 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 139389825 |
55 | NC_009271 | GAGG | 3 | 106302 | 106313 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 139389825 |
56 | NC_009271 | AGGT | 3 | 106514 | 106525 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 139389825 |
57 | NC_009271 | TAAG | 3 | 107634 | 107644 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 139389825 |
58 | NC_009271 | GAAA | 3 | 110560 | 110571 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 139389825 |
59 | NC_009271 | AAAC | 3 | 111540 | 111550 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 139389825 |
60 | NC_009271 | ATAG | 3 | 112642 | 112653 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 139389825 |
61 | NC_009271 | AATA | 3 | 114049 | 114059 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 139389825 |
62 | NC_009271 | AATT | 3 | 114133 | 114144 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 139389825 |
63 | NC_009271 | TATT | 3 | 114239 | 114250 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139389825 |
64 | NC_009271 | TTAA | 3 | 114548 | 114560 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 139389825 |
65 | NC_009271 | TATT | 3 | 114853 | 114864 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139389825 |
66 | NC_009271 | AAAT | 5 | 117639 | 117658 | 20 | 75 % | 25 % | 0 % | 0 % | 10 % | 139389825 |
67 | NC_009271 | TCTT | 3 | 120226 | 120237 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139389825 |
68 | NC_009271 | CTTT | 3 | 123941 | 123951 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139389825 |
69 | NC_009271 | TCAA | 3 | 124846 | 124856 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 139389825 |
70 | NC_009271 | CTTT | 3 | 125300 | 125310 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139389825 |
71 | NC_009271 | TTTG | 3 | 125861 | 125871 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 139389825 |
72 | NC_009271 | TCTT | 3 | 127437 | 127447 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139389825 |
73 | NC_009271 | CTTA | 3 | 131653 | 131663 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 139389825 |
74 | NC_009271 | GGAT | 3 | 136223 | 136234 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 139389825 |
75 | NC_009271 | AAAT | 3 | 140135 | 140146 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 139389825 |
76 | NC_009271 | AATA | 3 | 140147 | 140158 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 139389825 |
77 | NC_009271 | CATA | 3 | 141228 | 141239 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 139389825 |
78 | NC_009271 | ATCA | 3 | 148341 | 148353 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 139389867 |
79 | NC_009271 | TGAT | 3 | 148436 | 148448 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 139389867 |
80 | NC_009271 | AAAG | 3 | 150168 | 150178 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 139389867 |
81 | NC_009271 | TATT | 3 | 151251 | 151262 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139389867 |