Penta-nucleotide Imperfect Repeats of Capsella bursa-pastoris chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_009270 | GAAAA | 3 | 4496 | 4510 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
2 | NC_009270 | TCTCT | 3 | 5178 | 5191 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 139387234 |
3 | NC_009270 | GAATA | 4 | 26640 | 26658 | 19 | 60 % | 20 % | 20 % | 0 % | 10 % | Non-Coding |
4 | NC_009270 | GAAAA | 4 | 41759 | 41777 | 19 | 80 % | 0 % | 20 % | 0 % | 10 % | Non-Coding |
5 | NC_009270 | ACTAT | 3 | 47834 | 47848 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | Non-Coding |
6 | NC_009270 | TAATA | 4 | 50118 | 50136 | 19 | 60 % | 40 % | 0 % | 0 % | 10 % | Non-Coding |
7 | NC_009270 | GAAAA | 3 | 65407 | 65421 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
8 | NC_009270 | CAAAA | 3 | 69786 | 69800 | 15 | 80 % | 0 % | 0 % | 20 % | 6 % | 139387299 |
9 | NC_009270 | ATATG | 3 | 85768 | 85782 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 139387299 |
10 | NC_009270 | TCCGG | 3 | 94312 | 94326 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 139387299 |
11 | NC_009270 | TTTCG | 3 | 96902 | 96915 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 139387299 |
12 | NC_009270 | TCTAT | 3 | 99344 | 99358 | 15 | 20 % | 60 % | 0 % | 20 % | 0 % | 139387276 |
13 | NC_009270 | AATAA | 3 | 117113 | 117127 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 139387276 |
14 | NC_009270 | TTTCT | 3 | 124551 | 124565 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 139387276 |
15 | NC_009270 | TTTTC | 3 | 127740 | 127753 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 139387276 |
16 | NC_009270 | ACCGG | 3 | 143905 | 143919 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
17 | NC_009270 | CATAC | 3 | 145124 | 145137 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |