Tetra-nucleotide Imperfect Repeats of Capsella bursa-pastoris chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_009270 | TACC | 3 | 589 | 599 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 139387232 |
| 2 | NC_009270 | AAGA | 3 | 3413 | 3423 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 139387233 |
| 3 | NC_009270 | ATTC | 3 | 5561 | 5571 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 139387234 |
| 4 | NC_009270 | TTCT | 3 | 7553 | 7564 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139387236 |
| 5 | NC_009270 | TTTC | 3 | 12059 | 12070 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139387238 |
| 6 | NC_009270 | AATT | 3 | 13012 | 13022 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_009270 | AAAT | 3 | 13356 | 13367 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_009270 | TAAT | 3 | 13408 | 13419 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_009270 | TTTA | 3 | 14643 | 14654 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_009270 | AAAT | 3 | 27081 | 27091 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 11 | NC_009270 | CAAA | 3 | 27953 | 27964 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 12 | NC_009270 | AAAT | 3 | 28788 | 28798 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 13 | NC_009270 | TTTA | 3 | 28970 | 28980 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 14 | NC_009270 | GAAA | 3 | 29233 | 29243 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 15 | NC_009270 | TTTC | 3 | 30142 | 30152 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 16 | NC_009270 | GAAA | 3 | 33667 | 33678 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 193735615 |
| 17 | NC_009270 | GGGA | 3 | 33787 | 33798 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 193735615 |
| 18 | NC_009270 | AAAC | 3 | 36226 | 36237 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 19 | NC_009270 | AATA | 3 | 36807 | 36818 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_009270 | TAGA | 3 | 41781 | 41793 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | Non-Coding |
| 21 | NC_009270 | TTAA | 5 | 42379 | 42398 | 20 | 50 % | 50 % | 0 % | 0 % | 10 % | 139387253 |
| 22 | NC_009270 | GTTT | 3 | 42804 | 42815 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 139387253 |
| 23 | NC_009270 | GTAA | 3 | 43887 | 43897 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 24 | NC_009270 | TAAA | 3 | 45719 | 45730 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 25 | NC_009270 | TAAA | 3 | 45795 | 45805 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 26 | NC_009270 | ATAC | 3 | 47761 | 47771 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_009270 | AATT | 3 | 56463 | 56474 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_009270 | AATT | 3 | 62668 | 62678 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_009270 | TAAA | 4 | 62740 | 62755 | 16 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 30 | NC_009270 | CAGC | 3 | 63573 | 63584 | 12 | 25 % | 0 % | 25 % | 50 % | 8 % | 139387268 |
| 31 | NC_009270 | TTTC | 3 | 64082 | 64093 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 32 | NC_009270 | TTAA | 3 | 64270 | 64282 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 33 | NC_009270 | TTTA | 3 | 64540 | 64551 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_009270 | TTAA | 3 | 65537 | 65548 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 139387271 |
| 35 | NC_009270 | AAAG | 3 | 66393 | 66403 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 36 | NC_009270 | TGAA | 3 | 67733 | 67744 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_009270 | TTAT | 3 | 68003 | 68014 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139387275 |
| 38 | NC_009270 | TTTA | 3 | 69082 | 69092 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 39 | NC_009270 | TAAA | 3 | 70379 | 70390 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 139387299 |
| 40 | NC_009270 | TGTC | 3 | 70982 | 70992 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 139387299 |
| 41 | NC_009270 | AGAA | 3 | 72982 | 72993 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 139387299 |
| 42 | NC_009270 | TACT | 4 | 75877 | 75891 | 15 | 25 % | 50 % | 0 % | 25 % | 6 % | 139387299 |
| 43 | NC_009270 | ATTA | 3 | 77338 | 77349 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 139387299 |
| 44 | NC_009270 | TTCA | 3 | 79473 | 79484 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 139387299 |
| 45 | NC_009270 | TTTC | 4 | 81943 | 81958 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 139387299 |
| 46 | NC_009270 | TTCT | 3 | 82153 | 82164 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139387299 |
| 47 | NC_009270 | CAAT | 3 | 82460 | 82470 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 139387299 |
| 48 | NC_009270 | TTTC | 3 | 83490 | 83500 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139387299 |
| 49 | NC_009270 | TTCT | 3 | 87514 | 87524 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139387299 |
| 50 | NC_009270 | CTTT | 3 | 88725 | 88735 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139387299 |
| 51 | NC_009270 | TGAT | 3 | 90592 | 90604 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 139387299 |
| 52 | NC_009270 | AATA | 3 | 91439 | 91451 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 139387299 |
| 53 | NC_009270 | ATCC | 3 | 102653 | 102664 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 139387276 |
| 54 | NC_009270 | CTAT | 3 | 103048 | 103059 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 139387276 |
| 55 | NC_009270 | GAGG | 3 | 105892 | 105903 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 139387276 |
| 56 | NC_009270 | AGGT | 3 | 106104 | 106115 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 139387276 |
| 57 | NC_009270 | TAAG | 3 | 107224 | 107234 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 139387276 |
| 58 | NC_009270 | GAAA | 3 | 110138 | 110149 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 139387276 |
| 59 | NC_009270 | AAAC | 3 | 111118 | 111128 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 139387276 |
| 60 | NC_009270 | ATAG | 3 | 112220 | 112231 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 139387276 |
| 61 | NC_009270 | ATTT | 3 | 112431 | 112441 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 139387276 |
| 62 | NC_009270 | AAAT | 3 | 112576 | 112586 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 139387276 |
| 63 | NC_009270 | TTAA | 3 | 113973 | 113985 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 139387276 |
| 64 | NC_009270 | TATT | 3 | 114277 | 114288 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139387276 |
| 65 | NC_009270 | TCTT | 3 | 119605 | 119616 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 139387276 |
| 66 | NC_009270 | CTTT | 3 | 123330 | 123340 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139387276 |
| 67 | NC_009270 | TATT | 3 | 123507 | 123518 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139387276 |
| 68 | NC_009270 | TCAA | 3 | 124209 | 124219 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 139387276 |
| 69 | NC_009270 | CTTT | 3 | 124663 | 124673 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139387276 |
| 70 | NC_009270 | TTTG | 3 | 125224 | 125234 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 139387276 |
| 71 | NC_009270 | TCTT | 3 | 126794 | 126804 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 139387276 |
| 72 | NC_009270 | TATC | 3 | 126922 | 126934 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 139387276 |
| 73 | NC_009270 | CTTA | 3 | 130998 | 131008 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 139387276 |
| 74 | NC_009270 | GGAT | 3 | 135568 | 135579 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 139387276 |
| 75 | NC_009270 | AAAT | 3 | 139473 | 139484 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 139387276 |
| 76 | NC_009270 | AATA | 3 | 139485 | 139496 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 139387276 |
| 77 | NC_009270 | ATCA | 3 | 147670 | 147682 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 139387318 |
| 78 | NC_009270 | TGAT | 3 | 147765 | 147777 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 139387318 |
| 79 | NC_009270 | AAAG | 3 | 149497 | 149507 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 139387318 |
| 80 | NC_009270 | TATT | 3 | 150580 | 150591 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 139387318 |