Tetra-nucleotide Imperfect Repeats of Sorghum bicolor chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008602 | ACCT | 3 | 136 | 147 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 2 | NC_008602 | AAGT | 3 | 1312 | 1322 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 118614472 |
| 3 | NC_008602 | TTTA | 3 | 4990 | 5001 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_008602 | TTCT | 3 | 5637 | 5647 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 118614474 |
| 5 | NC_008602 | AAAT | 3 | 6706 | 6716 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_008602 | ATTT | 3 | 9382 | 9393 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_008602 | TTTA | 3 | 9686 | 9697 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_008602 | GAAA | 3 | 11399 | 11410 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 118614478 |
| 9 | NC_008602 | ATTT | 3 | 12370 | 12380 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 10 | NC_008602 | ATGA | 3 | 12449 | 12460 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_008602 | CTTT | 3 | 15176 | 15187 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 12 | NC_008602 | TAGG | 3 | 15714 | 15725 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 13 | NC_008602 | CAAT | 3 | 17068 | 17080 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 14 | NC_008602 | GTAT | 3 | 17834 | 17844 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 15 | NC_008602 | AAAG | 3 | 19500 | 19511 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_008602 | ATCA | 3 | 20101 | 20111 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_008602 | CTTT | 3 | 20456 | 20467 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 18 | NC_008602 | TAAA | 3 | 20774 | 20785 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_008602 | CTTT | 3 | 21136 | 21147 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 20 | NC_008602 | TTTC | 3 | 22864 | 22876 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 118614482 |
| 21 | NC_008602 | AAAT | 3 | 27212 | 27223 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 118614483 |
| 22 | NC_008602 | AGAA | 3 | 27462 | 27473 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 118614483 |
| 23 | NC_008602 | TTCA | 3 | 30202 | 30212 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 118614484 |
| 24 | NC_008602 | TTAA | 3 | 32478 | 32489 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_008602 | GAAA | 3 | 32621 | 32631 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 26 | NC_008602 | CTTT | 3 | 35397 | 35407 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_008602 | CTTT | 3 | 35802 | 35812 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 28 | NC_008602 | CATA | 3 | 36702 | 36712 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 118614488 |
| 29 | NC_008602 | AAAT | 3 | 39881 | 39892 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 118614491 |
| 30 | NC_008602 | AAGA | 3 | 42360 | 42371 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 118614492 |
| 31 | NC_008602 | CTAG | 3 | 43303 | 43315 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 118614492 |
| 32 | NC_008602 | ATCA | 3 | 45311 | 45321 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 157011954 |
| 33 | NC_008602 | TCCT | 3 | 45726 | 45737 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 157011954 |
| 34 | NC_008602 | AAAG | 3 | 47801 | 47811 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 35 | NC_008602 | TTAA | 3 | 49000 | 49010 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 36 | NC_008602 | AGAA | 3 | 49448 | 49459 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_008602 | GAAT | 3 | 49650 | 49660 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 38 | NC_008602 | TTGA | 3 | 49766 | 49778 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 39 | NC_008602 | CTTT | 3 | 53119 | 53130 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 40 | NC_008602 | AGAA | 3 | 53279 | 53289 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 41 | NC_008602 | TTTA | 3 | 53463 | 53473 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 42 | NC_008602 | TTCT | 3 | 53714 | 53724 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 43 | NC_008602 | TAGG | 4 | 54856 | 54871 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
| 44 | NC_008602 | AATT | 3 | 56995 | 57006 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 45 | NC_008602 | AATA | 3 | 59376 | 59387 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 46 | NC_008602 | TTAT | 3 | 60060 | 60071 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 118614502 |
| 47 | NC_008602 | ATTC | 3 | 62191 | 62201 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 48 | NC_008602 | GAAA | 3 | 68941 | 68951 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 49 | NC_008602 | AGAA | 3 | 71093 | 71104 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 118614537 |
| 50 | NC_008602 | ACTT | 3 | 73378 | 73388 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 118614537 |
| 51 | NC_008602 | TAAA | 5 | 74435 | 74454 | 20 | 75 % | 25 % | 0 % | 0 % | 10 % | 118614537 |
| 52 | NC_008602 | CTTT | 4 | 76947 | 76961 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 118614537 |
| 53 | NC_008602 | ATTT | 3 | 81845 | 81856 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 118614537 |
| 54 | NC_008602 | CTTT | 3 | 81884 | 81894 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 118614537 |
| 55 | NC_008602 | AGGT | 3 | 83587 | 83598 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 118614537 |
| 56 | NC_008602 | GATC | 3 | 88306 | 88317 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 118614537 |
| 57 | NC_008602 | TTCT | 3 | 93077 | 93087 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 118614537 |
| 58 | NC_008602 | TCTA | 3 | 94786 | 94797 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 118614550 |
| 59 | NC_008602 | AAAC | 3 | 98003 | 98015 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 118614550 |
| 60 | NC_008602 | ATCC | 3 | 98138 | 98149 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 118614550 |
| 61 | NC_008602 | CTAT | 3 | 98526 | 98537 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 118614550 |
| 62 | NC_008602 | ACGG | 3 | 101395 | 101406 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 118614550 |
| 63 | NC_008602 | AGGT | 3 | 101679 | 101690 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 118614550 |
| 64 | NC_008602 | AACG | 3 | 103004 | 103015 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | 118614550 |
| 65 | NC_008602 | AAAG | 4 | 104337 | 104352 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 118614550 |
| 66 | NC_008602 | CAAA | 3 | 108283 | 108293 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 118614550 |
| 67 | NC_008602 | GTTA | 3 | 108418 | 108428 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 118614550 |
| 68 | NC_008602 | ATTG | 3 | 108511 | 108522 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 118614550 |
| 69 | NC_008602 | GCAA | 3 | 109155 | 109165 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 118614550 |
| 70 | NC_008602 | ATTG | 3 | 113348 | 113360 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 118614550 |
| 71 | NC_008602 | TTTA | 3 | 113795 | 113806 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 118614550 |
| 72 | NC_008602 | ATCC | 3 | 117978 | 117989 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 118614550 |
| 73 | NC_008602 | AAAT | 3 | 118923 | 118933 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118614550 |
| 74 | NC_008602 | CTTT | 4 | 120136 | 120151 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 118614550 |
| 75 | NC_008602 | TCGT | 3 | 121472 | 121483 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 118614550 |
| 76 | NC_008602 | CTTA | 3 | 121679 | 121689 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 118614550 |
| 77 | NC_008602 | CCGT | 3 | 123082 | 123093 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 118614550 |
| 78 | NC_008602 | AGAA | 3 | 125856 | 125866 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 118614550 |
| 79 | NC_008602 | AGGA | 3 | 126115 | 126126 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 118614550 |
| 80 | NC_008602 | GGAT | 3 | 126339 | 126350 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 118614550 |
| 81 | NC_008602 | AGAA | 3 | 131401 | 131411 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 118614551 |
| 82 | NC_008602 | TGAA | 3 | 138065 | 138076 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |