Penta-nucleotide Imperfect Repeats of Hordeum vulgare subsp. vulgare chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008590 | TCTTT | 3 | 3112 | 3126 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 118430369 |
2 | NC_008590 | TCTCT | 3 | 5190 | 5203 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 118430370 |
3 | NC_008590 | CAAAT | 3 | 8958 | 8972 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
4 | NC_008590 | CGTAG | 3 | 12643 | 12656 | 14 | 20 % | 20 % | 40 % | 20 % | 7 % | Non-Coding |
5 | NC_008590 | TAGTT | 3 | 36435 | 36449 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | Non-Coding |
6 | NC_008590 | CCATA | 3 | 44175 | 44189 | 15 | 40 % | 20 % | 0 % | 40 % | 0 % | 118430389 |
7 | NC_008590 | TATCT | 3 | 45313 | 45327 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
8 | NC_008590 | AAACT | 3 | 51125 | 51139 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
9 | NC_008590 | AAAAT | 3 | 57777 | 57790 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
10 | NC_008590 | TTTTA | 3 | 58242 | 58255 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
11 | NC_008590 | TTGAA | 3 | 58992 | 59006 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | Non-Coding |
12 | NC_008590 | AAAGA | 3 | 65438 | 65451 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
13 | NC_008590 | TTTTC | 4 | 77680 | 77699 | 20 | 0 % | 80 % | 0 % | 20 % | 5 % | 118430432 |
14 | NC_008590 | AGAAT | 3 | 81537 | 81550 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 118430432 |
15 | NC_008590 | ATAGA | 3 | 85474 | 85487 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 118430432 |
16 | NC_008590 | CTGTT | 3 | 112970 | 112984 | 15 | 0 % | 60 % | 20 % | 20 % | 6 % | 118430445 |
17 | NC_008590 | GAAAA | 3 | 128909 | 128924 | 16 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |