Penta-nucleotide Imperfect Repeats of Thalassiosira pseudonana chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008589 | TCTAA | 3 | 7950 | 7963 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
2 | NC_008589 | AATTG | 3 | 9195 | 9208 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | 118411104 |
3 | NC_008589 | AAATG | 4 | 10523 | 10542 | 20 | 60 % | 20 % | 20 % | 0 % | 10 % | 118411105 |
4 | NC_008589 | TTAAA | 3 | 12535 | 12549 | 15 | 60 % | 40 % | 0 % | 0 % | 0 % | 118411106 |
5 | NC_008589 | TAAAA | 3 | 17077 | 17091 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
6 | NC_008589 | TTGAA | 3 | 24490 | 24503 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | 118411122 |
7 | NC_008589 | TTTCT | 4 | 37658 | 37678 | 21 | 0 % | 80 % | 0 % | 20 % | 9 % | 118411129 |
8 | NC_008589 | TTCAA | 4 | 41938 | 41956 | 19 | 40 % | 40 % | 0 % | 20 % | 10 % | 118411134 |
9 | NC_008589 | ATTTT | 3 | 42916 | 42931 | 16 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
10 | NC_008589 | TAAAA | 3 | 55740 | 55754 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
11 | NC_008589 | GGTAT | 3 | 58704 | 58718 | 15 | 20 % | 40 % | 40 % | 0 % | 6 % | 118411156 |
12 | NC_008589 | TAGAG | 3 | 67609 | 67623 | 15 | 40 % | 20 % | 40 % | 0 % | 6 % | Non-Coding |
13 | NC_008589 | AAAAT | 3 | 79193 | 79207 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 118411179 |
14 | NC_008589 | ATCTT | 3 | 110062 | 110076 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
15 | NC_008589 | TATTT | 3 | 114858 | 114872 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 118411227 |
16 | NC_008589 | CTCTA | 3 | 126442 | 126456 | 15 | 20 % | 40 % | 0 % | 40 % | 6 % | Non-Coding |