Tetra-nucleotide Imperfect Repeats of Thalassiosira pseudonana chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008589 | TATT | 3 | 85 | 95 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 2 | NC_008589 | AATT | 3 | 2418 | 2428 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_008589 | ATTA | 3 | 5925 | 5936 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 4 | NC_008589 | ATTT | 3 | 7198 | 7209 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 118411101 |
| 5 | NC_008589 | CAAT | 3 | 11077 | 11087 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 118411105 |
| 6 | NC_008589 | TTTA | 3 | 11637 | 11647 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 118411105 |
| 7 | NC_008589 | ATTT | 3 | 13825 | 13836 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 8 | NC_008589 | AAGA | 3 | 14567 | 14578 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 118411110 |
| 9 | NC_008589 | AATT | 3 | 17164 | 17175 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 10 | NC_008589 | TAAA | 3 | 18944 | 18954 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411114 |
| 11 | NC_008589 | TTTA | 3 | 18972 | 18982 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 118411115 |
| 12 | NC_008589 | AAAG | 5 | 20189 | 20208 | 20 | 75 % | 0 % | 25 % | 0 % | 10 % | Non-Coding |
| 13 | NC_008589 | AATT | 3 | 20447 | 20458 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 118411118 |
| 14 | NC_008589 | ATTT | 3 | 21605 | 21615 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 118411121 |
| 15 | NC_008589 | CAAA | 3 | 22840 | 22851 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 118411121 |
| 16 | NC_008589 | CAAA | 3 | 27101 | 27112 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 118411125 |
| 17 | NC_008589 | TTTA | 3 | 27248 | 27259 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 18 | NC_008589 | TTTC | 3 | 28836 | 28846 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 118411127 |
| 19 | NC_008589 | AATT | 3 | 30093 | 30103 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 118411127 |
| 20 | NC_008589 | ATAA | 3 | 30495 | 30505 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411127 |
| 21 | NC_008589 | CATA | 3 | 30659 | 30669 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 118411127 |
| 22 | NC_008589 | TTTA | 3 | 38210 | 38221 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 118411129 |
| 23 | NC_008589 | TTTA | 3 | 39226 | 39238 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 24 | NC_008589 | ATAA | 3 | 40027 | 40038 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 118411131 |
| 25 | NC_008589 | ATTT | 3 | 47528 | 47538 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 118411141 |
| 26 | NC_008589 | TAAA | 3 | 50098 | 50109 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_008589 | TAAA | 3 | 54340 | 54350 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 28 | NC_008589 | TAAA | 3 | 54544 | 54555 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_008589 | TACT | 3 | 55426 | 55437 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 30 | NC_008589 | CTGG | 3 | 56053 | 56063 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 118411153 |
| 31 | NC_008589 | TAAA | 3 | 59233 | 59243 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411156 |
| 32 | NC_008589 | ATTT | 3 | 59463 | 59474 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_008589 | ATAA | 3 | 59557 | 59568 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 118411157 |
| 34 | NC_008589 | AATT | 3 | 63969 | 63979 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 35 | NC_008589 | GATT | 3 | 65566 | 65577 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_008589 | GAAA | 3 | 67971 | 67981 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_008589 | AGCG | 3 | 68997 | 69007 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
| 38 | NC_008589 | AGGT | 3 | 70400 | 70411 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 39 | NC_008589 | GTAA | 3 | 71550 | 71561 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 40 | NC_008589 | TTAA | 3 | 76109 | 76120 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 118411176 |
| 41 | NC_008589 | GATT | 3 | 77756 | 77767 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 118411178 |
| 42 | NC_008589 | TAAT | 4 | 80063 | 80078 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 118411179 |
| 43 | NC_008589 | ACTT | 3 | 81874 | 81885 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_008589 | TAAA | 3 | 83445 | 83455 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 45 | NC_008589 | CTAT | 3 | 84658 | 84669 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 46 | NC_008589 | CTTT | 3 | 87833 | 87843 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 118411189 |
| 47 | NC_008589 | TTGT | 3 | 89278 | 89289 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 118411189 |
| 48 | NC_008589 | CAAT | 3 | 90052 | 90063 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 118411190 |
| 49 | NC_008589 | TTAA | 3 | 95091 | 95102 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 118411200 |
| 50 | NC_008589 | AAGG | 3 | 96601 | 96611 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 118411204 |
| 51 | NC_008589 | TAAA | 3 | 97455 | 97465 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411205 |
| 52 | NC_008589 | TTAA | 3 | 97952 | 97963 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 118411207 |
| 53 | NC_008589 | TTAT | 3 | 99161 | 99171 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 118411208 |
| 54 | NC_008589 | AAAT | 3 | 100797 | 100808 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 55 | NC_008589 | TAAT | 3 | 100842 | 100853 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 118411212 |
| 56 | NC_008589 | TTAC | 3 | 103033 | 103044 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 57 | NC_008589 | AGTT | 4 | 103554 | 103569 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | 118411217 |
| 58 | NC_008589 | TTAA | 3 | 105278 | 105289 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 118411218 |
| 59 | NC_008589 | TAAT | 3 | 105642 | 105652 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 60 | NC_008589 | GGGA | 3 | 105747 | 105758 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 61 | NC_008589 | TTAA | 3 | 109109 | 109120 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 62 | NC_008589 | ATTT | 4 | 110573 | 110587 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 63 | NC_008589 | TTTA | 3 | 110611 | 110621 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 64 | NC_008589 | AAGT | 3 | 112181 | 112192 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 65 | NC_008589 | AAAC | 3 | 113797 | 113808 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 118411226 |
| 66 | NC_008589 | TAAT | 4 | 113990 | 114005 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 118411227 |
| 67 | NC_008589 | AATC | 3 | 116299 | 116310 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 118411228 |
| 68 | NC_008589 | TCTT | 3 | 120006 | 120017 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 118411232 |
| 69 | NC_008589 | TTAC | 3 | 122454 | 122466 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 70 | NC_008589 | CTTT | 3 | 126083 | 126093 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 71 | NC_008589 | AATC | 3 | 128488 | 128499 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |