Tetra-nucleotide Imperfect Repeats of Phaeodactylum tricornutum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_008588 | ATAA | 3 | 4613 | 4623 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 2 | NC_008588 | TTAA | 3 | 4969 | 4979 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 118410966 |
| 3 | NC_008588 | AATT | 3 | 5924 | 5935 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_008588 | AATT | 3 | 6616 | 6626 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 118410969 |
| 5 | NC_008588 | CCAA | 3 | 15486 | 15496 | 11 | 50 % | 0 % | 0 % | 50 % | 9 % | 118410982 |
| 6 | NC_008588 | AACT | 3 | 15835 | 15846 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 118410983 |
| 7 | NC_008588 | TTAA | 3 | 18649 | 18660 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_008588 | TAAA | 3 | 18844 | 18855 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 118410990 |
| 9 | NC_008588 | TTTA | 3 | 18871 | 18881 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 118410991 |
| 10 | NC_008588 | AAAC | 3 | 20865 | 20875 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 11 | NC_008588 | TATT | 3 | 22798 | 22809 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 118410996 |
| 12 | NC_008588 | TAAA | 3 | 24151 | 24161 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 13 | NC_008588 | TTAA | 3 | 25017 | 25028 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 14 | NC_008588 | AAAT | 3 | 28779 | 28789 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411004 |
| 15 | NC_008588 | AATC | 3 | 31301 | 31312 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 118411008 |
| 16 | NC_008588 | ATAA | 3 | 32525 | 32537 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 118411010 |
| 17 | NC_008588 | TTTG | 3 | 36128 | 36139 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 118411014 |
| 18 | NC_008588 | ATTA | 4 | 36506 | 36521 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 19 | NC_008588 | ATTT | 3 | 38008 | 38018 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 118411017 |
| 20 | NC_008588 | AAAG | 3 | 51509 | 51519 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 118411024 |
| 21 | NC_008588 | AATT | 3 | 53404 | 53414 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 118411025 |
| 22 | NC_008588 | CTAA | 3 | 55150 | 55161 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 118411028 |
| 23 | NC_008588 | GAAA | 3 | 59764 | 59774 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 118411032 |
| 24 | NC_008588 | AATA | 3 | 67164 | 67175 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_008588 | ATAA | 3 | 68610 | 68621 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 26 | NC_008588 | AGGT | 3 | 68643 | 68654 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 27 | NC_008588 | CGAT | 3 | 73570 | 73580 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 118411045 |
| 28 | NC_008588 | GAAA | 3 | 74753 | 74763 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 118411045 |
| 29 | NC_008588 | ATTT | 3 | 74972 | 74983 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 118411045 |
| 30 | NC_008588 | TAAC | 3 | 80342 | 80352 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 118411051 |
| 31 | NC_008588 | AATT | 3 | 84903 | 84914 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 118411056 |
| 32 | NC_008588 | GATT | 4 | 86898 | 86913 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | 118411057 |
| 33 | NC_008588 | ATTC | 3 | 88147 | 88158 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 34 | NC_008588 | AAAT | 3 | 91394 | 91405 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 118411063 |
| 35 | NC_008588 | TTAA | 3 | 93735 | 93746 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 118411068 |
| 36 | NC_008588 | TTCA | 3 | 94329 | 94339 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 118411070 |
| 37 | NC_008588 | AATT | 3 | 94886 | 94898 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 118411071 |
| 38 | NC_008588 | AAAT | 3 | 96226 | 96236 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411074 |
| 39 | NC_008588 | ACTT | 3 | 100097 | 100108 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 118411080 |
| 40 | NC_008588 | TAAA | 3 | 100349 | 100359 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411080 |
| 41 | NC_008588 | AGTT | 4 | 102180 | 102195 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | 118411085 |
| 42 | NC_008588 | TTAA | 3 | 103891 | 103902 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 118411086 |
| 43 | NC_008588 | AATT | 3 | 107666 | 107677 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_008588 | AATA | 3 | 108462 | 108472 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411089 |
| 45 | NC_008588 | TAAA | 3 | 116667 | 116677 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 118411094 |
| 46 | NC_008588 | GGAT | 3 | 116902 | 116914 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 118411094 |
| 47 | NC_008588 | TAAA | 3 | 117094 | 117105 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |